STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
xseBExodeoxyribonuclease VII small subunit; Bidirectionally degrades single-stranded DNA into large acid- insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides; Belongs to the XseB family. (89 aa)    
Predicted Functional Partners:
xseA
Exodeoxyribonuclease VII large subunit; Bidirectionally degrades single-stranded DNA into large acid- insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides; Belongs to the XseA family.
  
 0.989
ABL64924.1
PFAM: ferredoxin; KEGG: cte:CT0651 chlorosome envelope protein J.
  
     0.708
ABL65819.1
PFAM: amine oxidase; KEGG: cte:CT1357 hypothetical protein.
  
    0.697
ABL64680.1
KEGG: plt:Plut_0499 hypothetical protein.
 
     0.696
ABL65027.1
PFAM: 5 nucleotidase, deoxy, cytosolic type C; KEGG: cte:CT1214 hypothetical protein.
  
     0.688
ABL64404.1
KEGG: plt:Plut_1902 hypothetical protein.
  
     0.665
ABL65693.1
KEGG: cch:Cag_1153 hypothetical protein.
  
     0.644
ABL65802.1
Putative PAS/PAC sensor protein; PFAM: PAS fold-3 domain protein; SMART: PAS domain containing protein; KEGG: plt:Plut_2017 hypothetical protein.
  
     0.642
ABL64486.1
PFAM: hydroxyneurosporene synthase; KEGG: plt:Plut_1720 hydroxyneurosporene synthase CrtC.
  
     0.634
ABL65134.1
KEGG: cte:CT0984 hypothetical protein.
  
     0.603
Your Current Organism:
Chlorobium phaeobacteroides DSM 266
NCBI taxonomy Id: 290317
Other names: C. phaeobacteroides DSM 266, Chlorobium phaeobacteroides DSMZ 266(T), Chlorobium phaeobacteroides str. DSM 266, Chlorobium phaeobacteroides strain DSM 266
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