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rny protein (Chlorobium phaeovibrioides) - STRING interaction network
"rny" - Ribonuclease Y in Chlorobium phaeovibrioides
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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Gene Fusion
Cooccurence
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[Homology]
Score
rnyRibonuclease Y; Endoribonuclease that initiates mRNA decay (524 aa)    
Predicted Functional Partners:
Cvib_0948
PFAM- phosphoesterase, RecJ domain protein; KEGG- plt-Plut_0953 Dhh family protein (355 aa)
 
     
  0.721
Cvib_0770
PFAM- PSP1 domain protein; KEGG- plt-Plut_1187 hypothetical protein (325 aa)
 
          0.719
pheT
TIGRFAM- phenylalanyl-tRNA synthetase, beta subunit; KEGG- plt-Plut_0711 phenylalanyl-tRNA synthetase, beta subunit (811 aa)
              0.589
pnp
Polyribonucleotide nucleotidyltransferase; Involved in mRNA degradation. Catalyzes the phosphorolysis of single-stranded polyribonucleotides processively in the 3’- to 5’-direction (732 aa)
     
 
  0.555
mutS2
Endonuclease MutS2; Endonuclease that is involved in the suppression of homologous recombination and may therefore have a key role in the control of bacterial genetic diversity (787 aa)
   
          0.503
Cvib_1113
Cell division protein ZapA; Activator of cell division through the inhibition of FtsZ GTPase activity, therefore promoting FtsZ assembly into bundles of protofilaments necessary for the formation of the division Z ring. It is recruited early at mid-cell but it is not essential for cell division (87 aa)
              0.488
rnc
Ribonuclease 3; Digests double-stranded RNA. Involved in the processing of primary rRNA transcript to yield the immediate precursors to the large and small rRNAs (23S and 16S). Processes some mRNAs, and tRNAs when they are encoded in the rRNA operon. Processes pre- crRNA and tracrRNA of type II CRISPR loci if present in the organism (259 aa)
           
  0.461
Cvib_1114
KEGG- plt-Plut_0712 hypothetical protein (101 aa)
              0.413
Your Current Organism:
Chlorobium phaeovibrioides
NCBI taxonomy Id: 290318
Other names: C. phaeovibrioides DSM 265, Chlorobium phaeovibrioides, Chlorobium phaeovibrioides DSM 265, Chlorobium phaeovibrioides DSM265, Chlorobium vibrioforme f. thiosulfatophilum DSM 265, Prosthecochloris vibrioformis DSM 265
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