STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AAur_0435Putative signal transduction histidine kinase; Identified by match to protein family HMM PF02518. (396 aa)    
Predicted Functional Partners:
AAur_0434
Putative integral membrane protein.
 
     0.958
AAur_0436
Two-component system response regulator.
 
 
 0.956
AAur_2970
Two-component system response regulator; Identified by match to protein family HMM PF00072; match to protein family HMM PF00196.
 
 
 0.671
AAur_2873
Putative transcriptional regulator, LuxR family; Identified by match to protein family HMM PF00196.
 
 
 0.564
AAur_4172
Two-component system response regulator; Identified by match to protein family HMM PF00072; match to protein family HMM PF00196.
 
 
 0.539
AAur_0466
Putative two-component system response regulator; Identified by match to protein family HMM PF00072; match to protein family HMM PF00196.
 
 
 0.533
AAur_0548
Two-component system response regulator; Identified by match to protein family HMM PF00072; match to protein family HMM PF00196.
 
 
 0.530
AAur_4184
Two-component system response regulator; Identified by match to protein family HMM PF00072; match to protein family HMM PF00196.
 
 
 0.522
AAur_2500
Putative two-component system response regulator; Identified by match to protein family HMM PF00072; match to protein family HMM PF00196.
 
 
 0.498
AAur_4027
Putative thioesterase family domain protein; Identified by match to protein family HMM PF03061.
  
     0.487
Your Current Organism:
Paenarthrobacter aurescens
NCBI taxonomy Id: 290340
Other names: Arthrobacter aurescens TC1, P. aurescens TC1, Paenarthrobacter aurescens TC1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.