Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
AAur_0162 | AAur_0636 | AAur_0162 | AAur_0636 | Putative hydrolase. | BNR/Asp-box repeat domain protein; Identified by match to protein family HMM PF02012; match to protein family HMM TIGR01451. | 0.677 |
AAur_0162 | AAur_2951 | AAur_0162 | AAur_2951 | Putative hydrolase. | Putative integral membrane protein. | 0.541 |
AAur_0162 | AAur_3476 | AAur_0162 | AAur_3476 | Putative hydrolase. | Putative Thymidylate kinase. | 0.480 |
AAur_0162 | AAur_3540 | AAur_0162 | AAur_3540 | Putative hydrolase. | BNR/Asp-box repeat domain protein; Identified by match to protein family HMM PF02012. | 0.579 |
AAur_0162 | AAur_3791 | AAur_0162 | AAur_3791 | Putative hydrolase. | Hypothetical protein; Identified by Glimmer2; putative. | 0.534 |
AAur_0162 | AAur_3997 | AAur_0162 | AAur_3997 | Putative hydrolase. | Hypothetical protein; Identified by Glimmer2; putative. | 0.596 |
AAur_0636 | AAur_0162 | AAur_0636 | AAur_0162 | BNR/Asp-box repeat domain protein; Identified by match to protein family HMM PF02012; match to protein family HMM TIGR01451. | Putative hydrolase. | 0.677 |
AAur_0636 | AAur_0825 | AAur_0636 | AAur_0825 | BNR/Asp-box repeat domain protein; Identified by match to protein family HMM PF02012; match to protein family HMM TIGR01451. | Putative dihydrodipicolinate synthase; Identified by match to protein family HMM PF00701; Belongs to the DapA family. | 0.659 |
AAur_0636 | AAur_1212 | AAur_0636 | AAur_1212 | BNR/Asp-box repeat domain protein; Identified by match to protein family HMM PF02012; match to protein family HMM TIGR01451. | Putative ABC transporter permease protein; Identified by match to protein family HMM PF02687. | 0.662 |
AAur_0636 | AAur_1732 | AAur_0636 | AAur_1732 | BNR/Asp-box repeat domain protein; Identified by match to protein family HMM PF02012; match to protein family HMM TIGR01451. | Identified by match to protein family HMM PF00884. | 0.921 |
AAur_0636 | AAur_2951 | AAur_0636 | AAur_2951 | BNR/Asp-box repeat domain protein; Identified by match to protein family HMM PF02012; match to protein family HMM TIGR01451. | Putative integral membrane protein. | 0.723 |
AAur_0636 | AAur_3476 | AAur_0636 | AAur_3476 | BNR/Asp-box repeat domain protein; Identified by match to protein family HMM PF02012; match to protein family HMM TIGR01451. | Putative Thymidylate kinase. | 0.652 |
AAur_0636 | AAur_3540 | AAur_0636 | AAur_3540 | BNR/Asp-box repeat domain protein; Identified by match to protein family HMM PF02012; match to protein family HMM TIGR01451. | BNR/Asp-box repeat domain protein; Identified by match to protein family HMM PF02012. | 0.925 |
AAur_0636 | AAur_3791 | AAur_0636 | AAur_3791 | BNR/Asp-box repeat domain protein; Identified by match to protein family HMM PF02012; match to protein family HMM TIGR01451. | Hypothetical protein; Identified by Glimmer2; putative. | 0.678 |
AAur_0636 | AAur_3997 | AAur_0636 | AAur_3997 | BNR/Asp-box repeat domain protein; Identified by match to protein family HMM PF02012; match to protein family HMM TIGR01451. | Hypothetical protein; Identified by Glimmer2; putative. | 0.711 |
AAur_0636 | rafA | AAur_0636 | AAur_3362 | BNR/Asp-box repeat domain protein; Identified by match to protein family HMM PF02012; match to protein family HMM TIGR01451. | Alpha-galactosidase (melibiase); Identified by match to protein family HMM PF02065. | 0.900 |
AAur_0825 | AAur_0636 | AAur_0825 | AAur_0636 | Putative dihydrodipicolinate synthase; Identified by match to protein family HMM PF00701; Belongs to the DapA family. | BNR/Asp-box repeat domain protein; Identified by match to protein family HMM PF02012; match to protein family HMM TIGR01451. | 0.659 |
AAur_0825 | AAur_3540 | AAur_0825 | AAur_3540 | Putative dihydrodipicolinate synthase; Identified by match to protein family HMM PF00701; Belongs to the DapA family. | BNR/Asp-box repeat domain protein; Identified by match to protein family HMM PF02012. | 0.692 |
AAur_1212 | AAur_0636 | AAur_1212 | AAur_0636 | Putative ABC transporter permease protein; Identified by match to protein family HMM PF02687. | BNR/Asp-box repeat domain protein; Identified by match to protein family HMM PF02012; match to protein family HMM TIGR01451. | 0.662 |
AAur_1212 | AAur_2951 | AAur_1212 | AAur_2951 | Putative ABC transporter permease protein; Identified by match to protein family HMM PF02687. | Putative integral membrane protein. | 0.639 |
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