STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
malFMaltose ABC transporter, permease protein; Identified by match to protein family HMM PF00528. (552 aa)    
Predicted Functional Partners:
malG
Maltose ABC transporter, permease protein; Identified by match to protein family HMM PF00528.
 
 0.998
malE
Identified by match to protein family HMM PF01547.
 0.996
AAur_0929
Putative sugar ABC transportor, ATP-binding protein; Identified by match to protein family HMM PF00005; match to protein family HMM PF03459; Belongs to the ABC transporter superfamily.
 
 0.950
AAur_0921
Identified by match to protein family HMM PF00128.
 
    0.946
AAur_0086
Putative ABC transporter sugar permease; Identified by match to protein family HMM PF00528.
 
   0.656
AAur_0917
Identified by match to protein family HMM PF00128.
 
    0.607
AAur_3941
Putative extracellular solute-binding lipoprotein; Identified by match to protein family HMM PF01547.
 
 
 0.604
AAur_3499
Putative ABC-type sugar transport system, permease component; Identified by match to protein family HMM PF00528.
 
 
 0.591
AAur_3032
Putative ABC-type sugar transport system, permease component; Identified by match to protein family HMM PF00528.
 
   0.575
AAur_0697
ABC-type sugar transport system, permease component; Identified by match to protein family HMM PF00528.
 
 
 0.565
Your Current Organism:
Paenarthrobacter aurescens
NCBI taxonomy Id: 290340
Other names: Arthrobacter aurescens TC1, P. aurescens TC1, Paenarthrobacter aurescens TC1
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