STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AAur_1431Putative serine/threonine protein kinase; Identified by match to protein family HMM PF00069. (606 aa)    
Predicted Functional Partners:
AAur_1429
Putative protein phosphatase; Identified by match to protein family HMM PF00481.
 
 
 0.979
AAur_1426
Putative Protein of unknown function DUF58; Identified by match to protein family HMM PF01882.
 
    0.943
AAur_1430
Hypothetical protein; Identified by Glimmer2; putative.
 
 
 
 0.938
AAur_1427
Putative protease, transglutaminase-like; Identified by match to protein family HMM PF01841.
 
     0.935
AAur_1432
Hypothetical protein; Identified by Glimmer2; putative.
 
 
 
 0.911
AAur_1428
Putative transmembrane protein, RDD family domain; Identified by match to protein family HMM PF06271.
 
    0.862
AAur_0032
Protein phosphatase - domain; Identified by match to protein family HMM PF00481.
 
 
 0.856
AAur_1424
Putative Unknown fibronectin like domains protein; Identified by match to protein family HMM PF00041.
 
  
 0.849
AAur_1433
Identified by match to protein family HMM PF00498; match to protein family HMM PF01580.
 
 
 
 0.828
AAur_1423
Putative Unknown fibronectin like domains protein; Identified by match to protein family HMM PF00041.
 
  
 0.819
Your Current Organism:
Paenarthrobacter aurescens
NCBI taxonomy Id: 290340
Other names: Arthrobacter aurescens TC1, P. aurescens TC1, Paenarthrobacter aurescens TC1
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