STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AAur_1465Conserved hypothetical protein. (1465 aa)    
Predicted Functional Partners:
AAur_1466
Putative SIS (Sugar ISomerase) domain protein; Identified by match to protein family HMM PF01380.
 
     0.667
AAur_3068
Putative polysaccharide lyase family 8; Identified by match to protein family HMM PF02278; match to protein family HMM PF08124; match to protein family HMM TIGR01409.
 
     0.653
AAur_0612
Putative extracellular solute-binding domain protein; Identified by match to protein family HMM PF01547.
  
     0.643
AAur_1178
Putative transcriptional regulator, LuxR family; Identified by match to protein family HMM PF00196.
  
     0.598
AAur_1067
Putative tetratricopeptide repeat family protein; Identified by match to protein family HMM PF07721.
 
     0.597
AAur_2244
Putative comEA protein; Identified by match to protein family HMM PF00633; match to protein family HMM TIGR00426.
  
  
 0.582
dprA
DNA protecting protein DprA; Identified by match to protein family HMM PF02481; match to protein family HMM TIGR00732.
  
  
 0.581
AAur_4159
Putative integral membrane protein.
  
     0.581
AAur_2850
Hypothetical protein; Identified by Glimmer2; putative.
  
     0.570
AAur_1468
Sugar kinase; Identified by match to protein family HMM PF00294.
 
  
 0.543
Your Current Organism:
Paenarthrobacter aurescens
NCBI taxonomy Id: 290340
Other names: Arthrobacter aurescens TC1, P. aurescens TC1, Paenarthrobacter aurescens TC1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.