Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
AAur_2451 | AAur_3341 | AAur_2451 | AAur_3341 | Conserved hypothetical protein; Belongs to the UPF0109 family. | Putative ATP-dependent RNA helicase; Identified by match to protein family HMM PF00270; match to protein family HMM PF00271. | 0.548 |
AAur_2451 | AAur_4206 | AAur_2451 | AAur_4206 | Conserved hypothetical protein; Belongs to the UPF0109 family. | Putative jag-like protein; Identified by match to protein family HMM PF01424. | 0.951 |
AAur_3339 | AAur_3340 | AAur_3339 | AAur_3340 | Putative rhodanese-like domain protein; Identified by match to protein family HMM PF00581; Belongs to the UPF0176 family. | Identified by match to protein family HMM PF00583. | 0.603 |
AAur_3339 | AAur_3341 | AAur_3339 | AAur_3341 | Putative rhodanese-like domain protein; Identified by match to protein family HMM PF00581; Belongs to the UPF0176 family. | Putative ATP-dependent RNA helicase; Identified by match to protein family HMM PF00270; match to protein family HMM PF00271. | 0.452 |
AAur_3340 | AAur_3339 | AAur_3340 | AAur_3339 | Identified by match to protein family HMM PF00583. | Putative rhodanese-like domain protein; Identified by match to protein family HMM PF00581; Belongs to the UPF0176 family. | 0.603 |
AAur_3340 | AAur_3341 | AAur_3340 | AAur_3341 | Identified by match to protein family HMM PF00583. | Putative ATP-dependent RNA helicase; Identified by match to protein family HMM PF00270; match to protein family HMM PF00271. | 0.590 |
AAur_3341 | AAur_2451 | AAur_3341 | AAur_2451 | Putative ATP-dependent RNA helicase; Identified by match to protein family HMM PF00270; match to protein family HMM PF00271. | Conserved hypothetical protein; Belongs to the UPF0109 family. | 0.548 |
AAur_3341 | AAur_3339 | AAur_3341 | AAur_3339 | Putative ATP-dependent RNA helicase; Identified by match to protein family HMM PF00270; match to protein family HMM PF00271. | Putative rhodanese-like domain protein; Identified by match to protein family HMM PF00581; Belongs to the UPF0176 family. | 0.452 |
AAur_3341 | AAur_3340 | AAur_3341 | AAur_3340 | Putative ATP-dependent RNA helicase; Identified by match to protein family HMM PF00270; match to protein family HMM PF00271. | Identified by match to protein family HMM PF00583. | 0.590 |
AAur_3341 | AAur_4206 | AAur_3341 | AAur_4206 | Putative ATP-dependent RNA helicase; Identified by match to protein family HMM PF00270; match to protein family HMM PF00271. | Putative jag-like protein; Identified by match to protein family HMM PF01424. | 0.511 |
AAur_3341 | topA | AAur_3341 | AAur_3334 | Putative ATP-dependent RNA helicase; Identified by match to protein family HMM PF00270; match to protein family HMM PF00271. | DNA topoisomerase I; Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA- (5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supe [...] | 0.426 |
AAur_4206 | AAur_2451 | AAur_4206 | AAur_2451 | Putative jag-like protein; Identified by match to protein family HMM PF01424. | Conserved hypothetical protein; Belongs to the UPF0109 family. | 0.951 |
AAur_4206 | AAur_3341 | AAur_4206 | AAur_3341 | Putative jag-like protein; Identified by match to protein family HMM PF01424. | Putative ATP-dependent RNA helicase; Identified by match to protein family HMM PF00270; match to protein family HMM PF00271. | 0.511 |
topA | AAur_3341 | AAur_3334 | AAur_3341 | DNA topoisomerase I; Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA- (5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supe [...] | Putative ATP-dependent RNA helicase; Identified by match to protein family HMM PF00270; match to protein family HMM PF00271. | 0.426 |