STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AAur_3950Putative serine/threonine protein kinase domain protein; Identified by match to protein family HMM PF00069. (447 aa)    
Predicted Functional Partners:
AAur_0032
Protein phosphatase - domain; Identified by match to protein family HMM PF00481.
 
 
 0.914
AAur_1429
Putative protein phosphatase; Identified by match to protein family HMM PF00481.
 
 
 0.888
AAur_1681
Putative FHA domain protein; Identified by match to protein family HMM PF00498.
 
 
 
 0.843
AAur_0028
Putative serine/threonine protein kinase; Identified by match to protein family HMM PF00069; match to protein family HMM PF03793.
 
 
0.767
AAur_0033
Putative FHA domain protein; Identified by match to protein family HMM PF00498.
 
 
 
 0.713
AAur_0034
Putative FHA domain protein; Identified by match to protein family HMM PF00498.
 
 
 
 0.712
AAur_1694
Putative Serine/threonine-protein kinase; Identified by match to protein family HMM PF00069; match to protein family HMM PF03793.
 
 
0.698
AAur_0031
Putative cell division protein FtsW; Identified by match to protein family HMM PF01098; Belongs to the SEDS family.
  
 
 0.564
AAur_0030
Penicillin binding protein transpeptidase domain; Identified by match to protein family HMM PF00905.
  
  
 0.518
AAur_3162
Putative cell surface polysaccharide biosynthesis; Identified by match to protein family HMM PF02706.
    
 
 0.452
Your Current Organism:
Paenarthrobacter aurescens
NCBI taxonomy Id: 290340
Other names: Arthrobacter aurescens TC1, P. aurescens TC1, Paenarthrobacter aurescens TC1
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