STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Adeh_4298NAD-dependent epimerase/dehydratase. (355 aa)    
Predicted Functional Partners:
Adeh_4299
NAD-dependent epimerase/dehydratase.
 
     0.936
Adeh_0877
Conserved hypothetical protein.
     0.929
Adeh_1061
NAD-dependent epimerase/dehydratase.
  
  
 
0.908
Adeh_4297
Nucleotidyl transferase.
 
 
 0.819
Adeh_1059
Conserved hypothetical protein.
 
    0.764
Adeh_1064
Glycosyl transferase, group 1.
 
    0.761
Adeh_1065
Conserved hypothetical protein.
 
    0.757
Adeh_1058
Conserved hypothetical protein.
 
    0.745
Adeh_0876
Methyltransferase type 11.
 
     0.739
Adeh_0874
Conserved hypothetical protein.
 
    0.731
Your Current Organism:
Anaeromyxobacter dehalogenans
NCBI taxonomy Id: 290397
Other names: A. dehalogenans 2CP-C, Anaeromyxobacter dehalogenans 2CP-C, Anaeromyxobacter dehalogenans ATCC BAA-259, Anaeromyxobacter dehalogenans str. 2CP-C, Anaeromyxobacter dehalogenans strain 2CP-C
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