Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Csal_0453 | Csal_1727 | Csal_0453 | Csal_1727 | Gluconolactonase. | Gluconolactonase. | 0.911 |
Csal_0453 | Csal_1729 | Csal_0453 | Csal_1729 | Gluconolactonase. | D-xylose dehydrogenase. | 0.945 |
Csal_0453 | Csal_2605 | Csal_0453 | Csal_2605 | Gluconolactonase. | 2-keto-3-deoxygalactonate kinase. | 0.594 |
Csal_0453 | Csal_2779 | Csal_0453 | Csal_2779 | Gluconolactonase. | Gluconolactonase. | 0.414 |
Csal_0453 | zwf | Csal_0453 | Csal_2741 | Gluconolactonase. | Glucose-6-phosphate 1-dehydrogenase; Catalyzes the oxidation of glucose 6-phosphate to 6- phosphogluconolactone. | 0.412 |
Csal_1727 | Csal_0453 | Csal_1727 | Csal_0453 | Gluconolactonase. | Gluconolactonase. | 0.911 |
Csal_1727 | Csal_1728 | Csal_1727 | Csal_1728 | Gluconolactonase. | Sugar transporter; Belongs to the major facilitator superfamily. Sugar transporter (TC 2.A.1.1) family. | 0.707 |
Csal_1727 | Csal_1729 | Csal_1727 | Csal_1729 | Gluconolactonase. | D-xylose dehydrogenase. | 0.968 |
Csal_1727 | Csal_2605 | Csal_1727 | Csal_2605 | Gluconolactonase. | 2-keto-3-deoxygalactonate kinase. | 0.545 |
Csal_1727 | Csal_2779 | Csal_1727 | Csal_2779 | Gluconolactonase. | Gluconolactonase. | 0.459 |
Csal_1727 | zwf | Csal_1727 | Csal_2741 | Gluconolactonase. | Glucose-6-phosphate 1-dehydrogenase; Catalyzes the oxidation of glucose 6-phosphate to 6- phosphogluconolactone. | 0.412 |
Csal_1728 | Csal_1727 | Csal_1728 | Csal_1727 | Sugar transporter; Belongs to the major facilitator superfamily. Sugar transporter (TC 2.A.1.1) family. | Gluconolactonase. | 0.707 |
Csal_1728 | Csal_1729 | Csal_1728 | Csal_1729 | Sugar transporter; Belongs to the major facilitator superfamily. Sugar transporter (TC 2.A.1.1) family. | D-xylose dehydrogenase. | 0.738 |
Csal_1729 | Csal_0453 | Csal_1729 | Csal_0453 | D-xylose dehydrogenase. | Gluconolactonase. | 0.945 |
Csal_1729 | Csal_1727 | Csal_1729 | Csal_1727 | D-xylose dehydrogenase. | Gluconolactonase. | 0.968 |
Csal_1729 | Csal_1728 | Csal_1729 | Csal_1728 | D-xylose dehydrogenase. | Sugar transporter; Belongs to the major facilitator superfamily. Sugar transporter (TC 2.A.1.1) family. | 0.738 |
Csal_1729 | Csal_2605 | Csal_1729 | Csal_2605 | D-xylose dehydrogenase. | 2-keto-3-deoxygalactonate kinase. | 0.440 |
Csal_2605 | Csal_0453 | Csal_2605 | Csal_0453 | 2-keto-3-deoxygalactonate kinase. | Gluconolactonase. | 0.594 |
Csal_2605 | Csal_1727 | Csal_2605 | Csal_1727 | 2-keto-3-deoxygalactonate kinase. | Gluconolactonase. | 0.545 |
Csal_2605 | Csal_1729 | Csal_2605 | Csal_1729 | 2-keto-3-deoxygalactonate kinase. | D-xylose dehydrogenase. | 0.440 |
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