Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Csal_0030 | Csal_1147 | Csal_0030 | Csal_1147 | 4-acetamidobutyryl-CoA deacetylase. | Acetylornithine deacetylase. | 0.927 |
Csal_0030 | Csal_2386 | Csal_0030 | Csal_2386 | 4-acetamidobutyryl-CoA deacetylase. | Acetylornithine deacetylase (ArgE). | 0.928 |
Csal_0030 | argB | Csal_0030 | Csal_2984 | 4-acetamidobutyryl-CoA deacetylase. | N-acetylglutamate kinase; Catalyzes the ATP-dependent phosphorylation of N-acetyl-L- glutamate; Belongs to the acetylglutamate kinase family. ArgB subfamily. | 0.648 |
Csal_0030 | argC | Csal_0030 | Csal_2714 | 4-acetamidobutyryl-CoA deacetylase. | N-acetyl-gamma-glutamyl-phosphate reductase; Catalyzes the NADPH-dependent reduction of N-acetyl-5- glutamyl phosphate to yield N-acetyl-L-glutamate 5-semialdehyde. Belongs to the NAGSA dehydrogenase family. Type 2 subfamily. | 0.730 |
Csal_0030 | argD | Csal_0030 | Csal_2808 | 4-acetamidobutyryl-CoA deacetylase. | Acetylornithine aminotransferase apoenzyme; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. ArgD subfamily. | 0.964 |
Csal_0030 | argF | Csal_0030 | Csal_2130 | 4-acetamidobutyryl-CoA deacetylase. | Ornithine carbamoyltransferase; Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline; Belongs to the aspartate/ornithine carbamoyltransferase superfamily. OTCase family. | 0.963 |
Csal_0030 | argG | Csal_0030 | Csal_2127 | 4-acetamidobutyryl-CoA deacetylase. | Argininosuccinate synthase; Belongs to the argininosuccinate synthase family. Type 1 subfamily. | 0.970 |
Csal_0030 | argH | Csal_0030 | Csal_3110 | 4-acetamidobutyryl-CoA deacetylase. | Argininosuccinate lyase. | 0.678 |
Csal_0030 | argJ | Csal_0030 | Csal_2180 | 4-acetamidobutyryl-CoA deacetylase. | Glutamate N-acetyltransferase; Catalyzes two activities which are involved in the cyclic version of arginine biosynthesis: the synthesis of N-acetylglutamate from glutamate and acetyl-CoA as the acetyl donor, and of ornithine by transacetylation between N(2)-acetylornithine and glutamate. Belongs to the ArgJ family. | 0.964 |
Csal_1147 | Csal_0030 | Csal_1147 | Csal_0030 | Acetylornithine deacetylase. | 4-acetamidobutyryl-CoA deacetylase. | 0.927 |
Csal_1147 | Csal_2386 | Csal_1147 | Csal_2386 | Acetylornithine deacetylase. | Acetylornithine deacetylase (ArgE). | 0.907 |
Csal_1147 | argB | Csal_1147 | Csal_2984 | Acetylornithine deacetylase. | N-acetylglutamate kinase; Catalyzes the ATP-dependent phosphorylation of N-acetyl-L- glutamate; Belongs to the acetylglutamate kinase family. ArgB subfamily. | 0.788 |
Csal_1147 | argC | Csal_1147 | Csal_2714 | Acetylornithine deacetylase. | N-acetyl-gamma-glutamyl-phosphate reductase; Catalyzes the NADPH-dependent reduction of N-acetyl-5- glutamyl phosphate to yield N-acetyl-L-glutamate 5-semialdehyde. Belongs to the NAGSA dehydrogenase family. Type 2 subfamily. | 0.849 |
Csal_1147 | argD | Csal_1147 | Csal_2808 | Acetylornithine deacetylase. | Acetylornithine aminotransferase apoenzyme; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. ArgD subfamily. | 0.965 |
Csal_1147 | argF | Csal_1147 | Csal_2130 | Acetylornithine deacetylase. | Ornithine carbamoyltransferase; Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline; Belongs to the aspartate/ornithine carbamoyltransferase superfamily. OTCase family. | 0.963 |
Csal_1147 | argG | Csal_1147 | Csal_2127 | Acetylornithine deacetylase. | Argininosuccinate synthase; Belongs to the argininosuccinate synthase family. Type 1 subfamily. | 0.984 |
Csal_1147 | argH | Csal_1147 | Csal_3110 | Acetylornithine deacetylase. | Argininosuccinate lyase. | 0.780 |
Csal_1147 | argJ | Csal_1147 | Csal_2180 | Acetylornithine deacetylase. | Glutamate N-acetyltransferase; Catalyzes two activities which are involved in the cyclic version of arginine biosynthesis: the synthesis of N-acetylglutamate from glutamate and acetyl-CoA as the acetyl donor, and of ornithine by transacetylation between N(2)-acetylornithine and glutamate. Belongs to the ArgJ family. | 0.963 |
Csal_2386 | Csal_0030 | Csal_2386 | Csal_0030 | Acetylornithine deacetylase (ArgE). | 4-acetamidobutyryl-CoA deacetylase. | 0.928 |
Csal_2386 | Csal_1147 | Csal_2386 | Csal_1147 | Acetylornithine deacetylase (ArgE). | Acetylornithine deacetylase. | 0.907 |
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