STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Csal_2269Protein of unknown function DUF877. (499 aa)    
Predicted Functional Partners:
Csal_2268
Uncharacterized conserved protein UCP028301.
 
 0.999
Csal_2263
Conserved hypothetical protein.
 
  
 0.977
Csal_2271
Protein of unknown function DUF879.
 
  
 0.973
Csal_2258
Protein of unknown function DUF796.
 
 
 0.969
Csal_2272
Protein of unknown function DUF1305.
 
  
 0.953
Csal_2270
Protein of unknown function DUF1316.
 
  
 0.950
Csal_2273
ATPase AAA-2; Belongs to the ClpA/ClpB family.
 
 
 0.946
Csal_2264
Protein of unknown function DUF876.
 
  
 0.931
Csal_2260
OmpA/MotB.
 
  
 0.929
Csal_2274
Rhs element Vgr protein.
 
  
 0.926
Your Current Organism:
Chromohalobacter salexigens
NCBI taxonomy Id: 290398
Other names: C. salexigens DSM 3043, Chromohalobacter salexigens 1H11, Chromohalobacter salexigens DSM 3043
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.