STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ugpCCarbohydrate ABC transporter ATP-binding protein, CUT1 family; Part of the ABC transporter complex UgpABCE involved in sn- glycerol-3-phosphate import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. sn-glycerol-3- phosphate importer (TC 3.A.1.1.3) family. (370 aa)    
Predicted Functional Partners:
ugpE
Carbohydrate ABC transporter membrane protein 2, CUT1 family; Part of the binding-protein-dependent transport system for sn-glycerol-3-phosphate; probably responsible for the translocation of the substrate across the membrane.
 0.995
Csal_2737
Carbohydrate ABC transporter membrane protein 1, CUT1 family; TC 3.A.1.1.-.
 
 0.994
Csal_2738
Carbohydrate ABC transporter substrate-binding protein, CUT1 family; TC 3.A.1.1.-.
 
 0.979
Csal_2611
Carbohydrate ABC transporter membrane protein 1, CUT1 family; TC 3.A.1.1.-.
 
 
 0.868
Csal_2612
Carbohydrate ABC transporter membrane protein 2, CUT1 family; TC 3.A.1.1.-.
 
 0.864
Csal_0260
Carbohydrate ABC transporter membrane protein 2, CUT1 family; TC 3.A.1.1.-.
 
 0.847
Csal_0259
Carbohydrate ABC transporter membrane protein 1, CUT1 family; TC 3.A.1.1.-.
 
 
 0.842
Csal_2415
Carbohydrate ABC transporter membrane protein 1, CUT1 family; TC 3.A.1.1.-.
 
 
 0.742
Csal_2414
Carbohydrate ABC transporter membrane protein 2, CUT1 family; TC 3.A.1.1.-.
 
 
 0.705
Csal_0634
Sorbitol ABC transporter membrane protein / mannitol ABC transporter membrane protein.
 
 
 0.687
Your Current Organism:
Chromohalobacter salexigens
NCBI taxonomy Id: 290398
Other names: C. salexigens DSM 3043, Chromohalobacter salexigens 1H11, Chromohalobacter salexigens DSM 3043
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