STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Csal_2782Amino acid ABC transporter membrane protein 1, PAAT family; TC 3.A.1.3.-. (238 aa)    
Predicted Functional Partners:
Csal_2781
Amino acid ABC transporter ATP-binding protein, PAAT family; TC 3.A.1.3.-.
 
 0.992
Csal_2784
Amino acid ABC transporter substrate-binding protein, PAAT family; TC 3.A.1.3.-; Belongs to the bacterial solute-binding protein 3 family.
 0.991
Csal_2783
Amino acid ABC transporter membrane protein 2, PAAT family; TC 3.A.1.3.-.
 
 
0.980
Csal_3298
Amino acid ABC transporter substrate-binding protein, PAAT family; TC 3.A.1.3.-; Belongs to the bacterial solute-binding protein 3 family.
 
 0.976
Csal_2793
Amino acid ABC transporter substrate-binding protein, PAAT family; TC 3.A.1.3.-; Belongs to the bacterial solute-binding protein 3 family.
 0.972
Csal_2600
Amino acid ABC transporter substrate-binding protein, PAAT family; TC 3.A.1.3.-.
 
 0.857
Csal_0534
Amino acid ABC transporter substrate-binding protein, PAAT family; TC 3.A.1.3.-; Belongs to the bacterial solute-binding protein 3 family.
 
 0.796
Csal_0535
Amino acid ABC transporter ATP-binding protein, PAAT family; TC 3.A.1.3.-.
     0.774
Csal_0153
Amino acid ABC transporter ATP-binding protein, PAAT family; TC 3.A.1.3.-.
     0.766
Csal_3296
Amino acid ABC transporter ATP-binding protein, PAAT family; TC 3.A.1.3.-.
     0.757
Your Current Organism:
Chromohalobacter salexigens
NCBI taxonomy Id: 290398
Other names: C. salexigens DSM 3043, Chromohalobacter salexigens 1H11, Chromohalobacter salexigens DSM 3043
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.