Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Csal_0274 | Csal_1735 | Csal_0274 | Csal_1735 | PfkB. | Altronate dehydratase. | 0.834 |
Csal_0274 | manD | Csal_0274 | Csal_2974 | PfkB. | D-mannonate dehydratase; Has low dehydratase activity with D-mannonate and D- gluconate, suggesting that these are not physiological substrates and that it has no significant role in the in vivo degradation of these compounds. Has no detectable activity with a panel of 70 other acid sugars (in vitro). | 0.833 |
Csal_0274 | uxuA | Csal_0274 | Csal_2980 | PfkB. | D-mannonate dehydratase; Catalyzes the dehydration of D-mannonate; Belongs to the mannonate dehydratase family. | 0.865 |
Csal_0357 | Csal_0666 | Csal_0357 | Csal_0666 | Ribose-5-phosphate isomerase. | 6-phosphogluconate dehydrogenase (decarboxylating). | 0.906 |
Csal_0357 | Csal_0757 | Csal_0357 | Csal_0757 | Ribose-5-phosphate isomerase. | Sugar-phosphate isomerase, RpiB/LacA/LacB family. | 0.906 |
Csal_0357 | Csal_1735 | Csal_0357 | Csal_1735 | Ribose-5-phosphate isomerase. | Altronate dehydratase. | 0.800 |
Csal_0357 | manD | Csal_0357 | Csal_2974 | Ribose-5-phosphate isomerase. | D-mannonate dehydratase; Has low dehydratase activity with D-mannonate and D- gluconate, suggesting that these are not physiological substrates and that it has no significant role in the in vivo degradation of these compounds. Has no detectable activity with a panel of 70 other acid sugars (in vitro). | 0.800 |
Csal_0357 | rpiA | Csal_0357 | Csal_0019 | Ribose-5-phosphate isomerase. | Ribose-5-phosphate isomerase; Catalyzes the reversible conversion of ribose-5-phosphate to ribulose 5-phosphate. | 0.913 |
Csal_0357 | uxuA | Csal_0357 | Csal_2980 | Ribose-5-phosphate isomerase. | D-mannonate dehydratase; Catalyzes the dehydration of D-mannonate; Belongs to the mannonate dehydratase family. | 0.812 |
Csal_0666 | Csal_0357 | Csal_0666 | Csal_0357 | 6-phosphogluconate dehydrogenase (decarboxylating). | Ribose-5-phosphate isomerase. | 0.906 |
Csal_0666 | Csal_0757 | Csal_0666 | Csal_0757 | 6-phosphogluconate dehydrogenase (decarboxylating). | Sugar-phosphate isomerase, RpiB/LacA/LacB family. | 0.906 |
Csal_0666 | Csal_1735 | Csal_0666 | Csal_1735 | 6-phosphogluconate dehydrogenase (decarboxylating). | Altronate dehydratase. | 0.800 |
Csal_0666 | manD | Csal_0666 | Csal_2974 | 6-phosphogluconate dehydrogenase (decarboxylating). | D-mannonate dehydratase; Has low dehydratase activity with D-mannonate and D- gluconate, suggesting that these are not physiological substrates and that it has no significant role in the in vivo degradation of these compounds. Has no detectable activity with a panel of 70 other acid sugars (in vitro). | 0.800 |
Csal_0666 | rpiA | Csal_0666 | Csal_0019 | 6-phosphogluconate dehydrogenase (decarboxylating). | Ribose-5-phosphate isomerase; Catalyzes the reversible conversion of ribose-5-phosphate to ribulose 5-phosphate. | 0.928 |
Csal_0666 | uxuA | Csal_0666 | Csal_2980 | 6-phosphogluconate dehydrogenase (decarboxylating). | D-mannonate dehydratase; Catalyzes the dehydration of D-mannonate; Belongs to the mannonate dehydratase family. | 0.810 |
Csal_0757 | Csal_0357 | Csal_0757 | Csal_0357 | Sugar-phosphate isomerase, RpiB/LacA/LacB family. | Ribose-5-phosphate isomerase. | 0.906 |
Csal_0757 | Csal_0666 | Csal_0757 | Csal_0666 | Sugar-phosphate isomerase, RpiB/LacA/LacB family. | 6-phosphogluconate dehydrogenase (decarboxylating). | 0.906 |
Csal_0757 | Csal_1735 | Csal_0757 | Csal_1735 | Sugar-phosphate isomerase, RpiB/LacA/LacB family. | Altronate dehydratase. | 0.800 |
Csal_0757 | manD | Csal_0757 | Csal_2974 | Sugar-phosphate isomerase, RpiB/LacA/LacB family. | D-mannonate dehydratase; Has low dehydratase activity with D-mannonate and D- gluconate, suggesting that these are not physiological substrates and that it has no significant role in the in vivo degradation of these compounds. Has no detectable activity with a panel of 70 other acid sugars (in vitro). | 0.800 |
Csal_0757 | rpiA | Csal_0757 | Csal_0019 | Sugar-phosphate isomerase, RpiB/LacA/LacB family. | Ribose-5-phosphate isomerase; Catalyzes the reversible conversion of ribose-5-phosphate to ribulose 5-phosphate. | 0.913 |
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