STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Csal_2975Alcohol dehydrogenase GroES-like protein. (340 aa)    
Predicted Functional Partners:
Csal_2979
Fructuronate reductase; Belongs to the mannitol dehydrogenase family.
    
 0.976
manD
D-mannonate dehydratase; Has low dehydratase activity with D-mannonate and D- gluconate, suggesting that these are not physiological substrates and that it has no significant role in the in vivo degradation of these compounds. Has no detectable activity with a panel of 70 other acid sugars (in vitro).
  
  
 0.892
Csal_2474
NAD-dependent epimerase/dehydratase.
   
 
 0.867
uxuA
D-mannonate dehydratase; Catalyzes the dehydration of D-mannonate; Belongs to the mannonate dehydratase family.
 
  
 0.795
Csal_2973
Transcriptional regulator, GntR family.
     
 0.784
Csal_2976
TRAP dicarboxylate transporter, DctP subunit.
     
 0.637
Csal_2977
Tripartite ATP-independent periplasmic transporter, DctQ component.
 
     0.553
Csal_2648
PTS system D-fructose-specific IIA component (F1P-forming), Frc family / Phosphocarrier protein HPr; TC 4.A.2.1.1; Belongs to the PEP-utilizing enzyme family.
     
 0.550
Csal_2972
DNA replication and repair protein RadC; Belongs to the UPF0758 family.
       0.439
Your Current Organism:
Chromohalobacter salexigens
NCBI taxonomy Id: 290398
Other names: C. salexigens DSM 3043, Chromohalobacter salexigens 1H11, Chromohalobacter salexigens DSM 3043
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