STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Arth_0543Exo-alpha-sialidase; KEGG: pac:PPA1560 sialidase precursor. (1015 aa)    
Predicted Functional Partners:
Arth_0189
Exo-alpha-sialidase; KEGG: pac:PPA1560 sialidase precursor.
  
  
 
0.926
Arth_3388
PFAM: glycoside hydrolase, clan GH-D; KEGG: vvy:VVA0166 alpha-galactosidase.
     
  0.900
Arth_3325
Beta-galactosidase; PFAM: Glycoside hydrolase, family 42, N-terminal domain protein; Beta-galactosidase trimerisation domain protein; Beta-galactosidase C-terminal domain protein; KEGG: sma:SAV1027 putative beta-galactosidase.
  
 0.778
Arth_0184
PFAM: dihydrodipicolinate synthetase; KEGG: cdi:DIP0511 putative lysine biosynthesis protein; Belongs to the DapA family.
 
   
 0.702
Arth_0188
Extracellular solute-binding protein; TIGRFAM: Twin-arginine translocation pathway signal; PFAM: extracellular solute-binding protein, family 5; KEGG: hdu:HD1669 putative ABC transporter periplasmic binding protein.
 
   
 0.671
Arth_2535
PFAM: protein of unknown function DUF214; KEGG: tte:TTE2712 hypothetical protein.
  
     0.669
Arth_2726
KEGG: noc:Noc_1885 hypothetical protein.
  
   
 0.668
Arth_3966
Hypothetical protein.
  
     0.667
Arth_0186
ABC transporter related protein; PFAM: binding-protein-dependent transport systems inner membrane component; ABC transporter related; Oligopeptide/dipeptide ABC transporter, C-terminal domain protein; SMART: AAA ATPase; KEGG: hdu:HD1671 ABC transporter, ATP-binding protein and permease protein.
 
     0.662
Arth_2876
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: ava:Ava_2224 ABC transporter-like.
  
     0.621
Your Current Organism:
Arthrobacter sp. FB24
NCBI taxonomy Id: 290399
Other names: A. sp. FB24
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.