STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Arth_0664Amino acid/amide ABC transporter ATP-binding protein 2, HAAT family; KEGG: cgb:cg1845 hypothetical protein; TC 3.A.1.4.-. (224 aa)    
Predicted Functional Partners:
Arth_0663
PFAM: ABC-2 type transporter; KEGG: lxx:Lxx23320 membrane protein.
 
     0.943
Arth_0662
PFAM: regulatory protein, TetR; KEGG: sma:SAV6104 TetR-family transcriptional regulator.
 
     0.878
Arth_0665
Pyridine nucleotide-disulfide oxidoreductase dimerization region; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; pyridine nucleotide-disulphide oxidoreductase dimerisation region; FAD dependent oxidoreductase; KEGG: sco:SCO0884 putative dihydrolipoamide dehydrogenase.
  
    0.567
Arth_2726
KEGG: noc:Noc_1885 hypothetical protein.
  
    0.527
Arth_0286
L-lysine 6-monooxygenase (NADPH); KEGG: sco:SCO2783 monooxygenase.
  
  
 0.520
Arth_0018
KEGG: sma:SAV4334 hypothetical protein.
  
     0.464
rnc
RNAse III; Digests double-stranded RNA. Involved in the processing of primary rRNA transcript to yield the immediate precursors to the large and small rRNAs (23S and 16S). Processes some mRNAs, and tRNAs when they are encoded in the rRNA operon. Processes pre-crRNA and tracrRNA of type II CRISPR loci if present in the organism.
  
    0.458
Arth_2497
KEGG: sma:SAV5969 hypothetical protein.
 
     0.415
Arth_3060
KEGG: nfa:nfa5720 hypothetical protein.
  
     0.404
Your Current Organism:
Arthrobacter sp. FB24
NCBI taxonomy Id: 290399
Other names: A. sp. FB24
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.