STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
acyPPFAM: acylphosphatase; KEGG: nfa:nfa41730 putative acylphosphatase. (109 aa)    
Predicted Functional Partners:
Arth_3240
Phosphotransacetylase; Involved in acetate metabolism. In the N-terminal section; belongs to the CobB/CobQ family.
    
 0.922
ackA
Acetate kinase; Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction; Belongs to the acetokinase family.
     
 0.912
Arth_1894
PFAM: aldehyde dehydrogenase; KEGG: csa:Csal_0348 aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family.
    
 0.905
Arth_2001
PFAM: aldehyde dehydrogenase; KEGG: cef:CE0555 putative aldehyde dehydrogenase.
    
 0.905
Arth_2364
PFAM: aldehyde dehydrogenase; KEGG: sma:SAV1187 putative aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family.
    
 0.905
Arth_3088
PFAM: aldehyde dehydrogenase; KEGG: mpa:MAP3952 aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family.
    
 0.905
Arth_3592
PFAM: aldehyde dehydrogenase; KEGG: reu:Reut_C6374 betaine-aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family.
    
 0.905
Arth_0135
PFAM: Amidase; KEGG: tfu:Tfu_2207 amidase; Belongs to the amidase family.
    
  0.904
Arth_0433
PFAM: AMP-dependent synthetase and ligase; KEGG: sco:SCO6195 putative acetyl-coenzyme A synthetase.
     
 0.901
Arth_0511
PFAM: AMP-dependent synthetase and ligase; KEGG: pol:Bpro_0761 AMP-dependent synthetase and ligase.
     
 0.901
Your Current Organism:
Arthrobacter sp. FB24
NCBI taxonomy Id: 290399
Other names: A. sp. FB24
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