node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Arth_2393 | Arth_2785 | Arth_2393 | Arth_2785 | TIGRFAM: ribonuclease, Rne/Rng family; PFAM: RNA binding S1 domain protein; KEGG: sma:SAV5465 hypothetical protein. | PFAM: helicase domain protein; DEAD/DEAH box helicase domain protein; KEGG: sco:SCO5166 helicase; Belongs to the DEAD box helicase family. | 0.663 |
Arth_2393 | Arth_3772 | Arth_2393 | Arth_3772 | TIGRFAM: ribonuclease, Rne/Rng family; PFAM: RNA binding S1 domain protein; KEGG: sma:SAV5465 hypothetical protein. | PFAM: helicase domain protein; DEAD/DEAH box helicase domain protein; KEGG: lxx:Lxx20780 ATP-dependent RNA helicase. | 0.663 |
Arth_2393 | Arth_4157 | Arth_2393 | Arth_4157 | TIGRFAM: ribonuclease, Rne/Rng family; PFAM: RNA binding S1 domain protein; KEGG: sma:SAV5465 hypothetical protein. | Metal dependent phosphohydrolase; KEGG: sma:SAV4299 putative RNA nucleotidyltransferase; TIGRFAM: metal dependent phophohydrolase; PFAM: Polynucleotide adenylyltransferase region; metal-dependent phosphohydrolase, HD sub domain; SMART: metal-dependent phosphohydrolase, HD region; Belongs to the tRNA nucleotidyltransferase/poly(A) polymerase family. | 0.489 |
Arth_2393 | deaD | Arth_2393 | Arth_3048 | TIGRFAM: ribonuclease, Rne/Rng family; PFAM: RNA binding S1 domain protein; KEGG: sma:SAV5465 hypothetical protein. | ATP-dependent RNA helicase CsdA; DEAD-box RNA helicase involved in various cellular processes at low temperature, including ribosome biogenesis, mRNA degradation and translation initiation. | 0.663 |
Arth_2393 | eno | Arth_2393 | Arth_1147 | TIGRFAM: ribonuclease, Rne/Rng family; PFAM: RNA binding S1 domain protein; KEGG: sma:SAV5465 hypothetical protein. | Enolase; Catalyzes the reversible conversion of 2-phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis; Belongs to the enolase family. | 0.747 |
Arth_2393 | pnp | Arth_2393 | Arth_1434 | TIGRFAM: ribonuclease, Rne/Rng family; PFAM: RNA binding S1 domain protein; KEGG: sma:SAV5465 hypothetical protein. | Polyribonucleotide nucleotidyltransferase; Involved in mRNA degradation. Catalyzes the phosphorolysis of single-stranded polyribonucleotides processively in the 3'- to 5'- direction. | 0.946 |
Arth_2393 | rho | Arth_2393 | Arth_2620 | TIGRFAM: ribonuclease, Rne/Rng family; PFAM: RNA binding S1 domain protein; KEGG: sma:SAV5465 hypothetical protein. | Transcription termination factor Rho; Facilitates transcription termination by a mechanism that involves Rho binding to the nascent RNA, activation of Rho's RNA- dependent ATPase activity, and release of the mRNA from the DNA template. | 0.547 |
Arth_2785 | Arth_2393 | Arth_2785 | Arth_2393 | PFAM: helicase domain protein; DEAD/DEAH box helicase domain protein; KEGG: sco:SCO5166 helicase; Belongs to the DEAD box helicase family. | TIGRFAM: ribonuclease, Rne/Rng family; PFAM: RNA binding S1 domain protein; KEGG: sma:SAV5465 hypothetical protein. | 0.663 |
Arth_2785 | eno | Arth_2785 | Arth_1147 | PFAM: helicase domain protein; DEAD/DEAH box helicase domain protein; KEGG: sco:SCO5166 helicase; Belongs to the DEAD box helicase family. | Enolase; Catalyzes the reversible conversion of 2-phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis; Belongs to the enolase family. | 0.528 |
Arth_2785 | pnp | Arth_2785 | Arth_1434 | PFAM: helicase domain protein; DEAD/DEAH box helicase domain protein; KEGG: sco:SCO5166 helicase; Belongs to the DEAD box helicase family. | Polyribonucleotide nucleotidyltransferase; Involved in mRNA degradation. Catalyzes the phosphorolysis of single-stranded polyribonucleotides processively in the 3'- to 5'- direction. | 0.844 |
Arth_2785 | rpoA | Arth_2785 | Arth_2940 | PFAM: helicase domain protein; DEAD/DEAH box helicase domain protein; KEGG: sco:SCO5166 helicase; Belongs to the DEAD box helicase family. | DNA-directed RNA polymerase subunit alpha; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.664 |
Arth_2785 | rpsO | Arth_2785 | Arth_1433 | PFAM: helicase domain protein; DEAD/DEAH box helicase domain protein; KEGG: sco:SCO5166 helicase; Belongs to the DEAD box helicase family. | SSU ribosomal protein S15P; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it helps nucleate assembly of the platform of the 30S subunit by binding and bridging several RNA helices of the 16S rRNA. | 0.653 |
Arth_3772 | Arth_2393 | Arth_3772 | Arth_2393 | PFAM: helicase domain protein; DEAD/DEAH box helicase domain protein; KEGG: lxx:Lxx20780 ATP-dependent RNA helicase. | TIGRFAM: ribonuclease, Rne/Rng family; PFAM: RNA binding S1 domain protein; KEGG: sma:SAV5465 hypothetical protein. | 0.663 |
Arth_3772 | eno | Arth_3772 | Arth_1147 | PFAM: helicase domain protein; DEAD/DEAH box helicase domain protein; KEGG: lxx:Lxx20780 ATP-dependent RNA helicase. | Enolase; Catalyzes the reversible conversion of 2-phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis; Belongs to the enolase family. | 0.528 |
Arth_3772 | pnp | Arth_3772 | Arth_1434 | PFAM: helicase domain protein; DEAD/DEAH box helicase domain protein; KEGG: lxx:Lxx20780 ATP-dependent RNA helicase. | Polyribonucleotide nucleotidyltransferase; Involved in mRNA degradation. Catalyzes the phosphorolysis of single-stranded polyribonucleotides processively in the 3'- to 5'- direction. | 0.868 |
Arth_3772 | rpoA | Arth_3772 | Arth_2940 | PFAM: helicase domain protein; DEAD/DEAH box helicase domain protein; KEGG: lxx:Lxx20780 ATP-dependent RNA helicase. | DNA-directed RNA polymerase subunit alpha; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.664 |
Arth_3772 | rpsO | Arth_3772 | Arth_1433 | PFAM: helicase domain protein; DEAD/DEAH box helicase domain protein; KEGG: lxx:Lxx20780 ATP-dependent RNA helicase. | SSU ribosomal protein S15P; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it helps nucleate assembly of the platform of the 30S subunit by binding and bridging several RNA helices of the 16S rRNA. | 0.653 |
Arth_4157 | Arth_2393 | Arth_4157 | Arth_2393 | Metal dependent phosphohydrolase; KEGG: sma:SAV4299 putative RNA nucleotidyltransferase; TIGRFAM: metal dependent phophohydrolase; PFAM: Polynucleotide adenylyltransferase region; metal-dependent phosphohydrolase, HD sub domain; SMART: metal-dependent phosphohydrolase, HD region; Belongs to the tRNA nucleotidyltransferase/poly(A) polymerase family. | TIGRFAM: ribonuclease, Rne/Rng family; PFAM: RNA binding S1 domain protein; KEGG: sma:SAV5465 hypothetical protein. | 0.489 |
Arth_4157 | eno | Arth_4157 | Arth_1147 | Metal dependent phosphohydrolase; KEGG: sma:SAV4299 putative RNA nucleotidyltransferase; TIGRFAM: metal dependent phophohydrolase; PFAM: Polynucleotide adenylyltransferase region; metal-dependent phosphohydrolase, HD sub domain; SMART: metal-dependent phosphohydrolase, HD region; Belongs to the tRNA nucleotidyltransferase/poly(A) polymerase family. | Enolase; Catalyzes the reversible conversion of 2-phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis; Belongs to the enolase family. | 0.549 |
Arth_4157 | pnp | Arth_4157 | Arth_1434 | Metal dependent phosphohydrolase; KEGG: sma:SAV4299 putative RNA nucleotidyltransferase; TIGRFAM: metal dependent phophohydrolase; PFAM: Polynucleotide adenylyltransferase region; metal-dependent phosphohydrolase, HD sub domain; SMART: metal-dependent phosphohydrolase, HD region; Belongs to the tRNA nucleotidyltransferase/poly(A) polymerase family. | Polyribonucleotide nucleotidyltransferase; Involved in mRNA degradation. Catalyzes the phosphorolysis of single-stranded polyribonucleotides processively in the 3'- to 5'- direction. | 0.826 |