STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Arth_1606PFAM: protein kinase; SMART: tyrosine protein kinase; serine/threonine protein kinase; KEGG: tfu:Tfu_0454 tyrosine protein kinase:serine/threonine protein kinase. (561 aa)    
Predicted Functional Partners:
Arth_0024
PFAM: protein phosphatase 2C domain protein; KEGG: sco:SCO3845 putative protein phosphatase.
 
 
 0.851
Arth_1292
PFAM: protein phosphatase 2C domain protein; KEGG: lxx:Lxx12030 protein phosphatase.
 
 
 0.850
Arth_1002
PFAM: protein kinase; SMART: tyrosine protein kinase; serine/threonine protein kinase; KEGG: sma:SAV639 serine/threonine protein kinase.
  
     0.774
lipB
Lipoate-protein ligase B; Catalyzes the transfer of endogenously produced octanoic acid from octanoyl-acyl-carrier-protein onto the lipoyl domains of lipoate- dependent enzymes. Lipoyl-ACP can also act as a substrate although octanoyl-ACP is likely to be the physiological substrate.
       0.640
lipA-2
Lipoic acid synthetase; Catalyzes the radical-mediated insertion of two sulfur atoms into the C-6 and C-8 positions of the octanoyl moiety bound to the lipoyl domains of lipoate-dependent enzymes, thereby converting the octanoylated domains into lipoylated derivatives.
       0.587
Arth_0026
FHA domain containing protein; PFAM: Forkhead-associated protein; KEGG: blo:BL0583 hypothetical protein with FHA domain.
 
 
 
 0.584
Arth_1541
FHA domain containing protein; PFAM: Forkhead-associated protein; KEGG: sco:SCO1384 hypothetical protein.
 
 
 
 0.550
Arth_1054
FHA domain containing protein; PFAM: Forkhead-associated protein; KEGG: pac:PPA1084 putative signal transduction protein GarA.
 
 
 0.543
Arth_3195
PFAM: lipopolysaccharide biosynthesis; KEGG: cgb:cg0414 cell surface polysaccharide biosynthesis/chain length determinant protein.
    
 
 0.538
Arth_1603
KEGG: lxx:Lxx10100 integral membrane protein.
       0.516
Your Current Organism:
Arthrobacter sp. FB24
NCBI taxonomy Id: 290399
Other names: A. sp. FB24
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