node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Arth_1691 | Arth_2304 | Arth_1691 | Arth_2304 | PFAM: glutamine amidotransferase, class-II; glutamate synthase, alpha subunit domain protein; ferredoxin-dependent glutamate synthase; glutamate synthase; KEGG: lxx:Lxx11320 glutamate synthase, alpha subunit. | PFAM: protein of unknown function DUF28; KEGG: mbo:Mb2635c hypothetical protein. | 0.629 |
Arth_2304 | Arth_1691 | Arth_2304 | Arth_1691 | PFAM: protein of unknown function DUF28; KEGG: mbo:Mb2635c hypothetical protein. | PFAM: glutamine amidotransferase, class-II; glutamate synthase, alpha subunit domain protein; ferredoxin-dependent glutamate synthase; glutamate synthase; KEGG: lxx:Lxx11320 glutamate synthase, alpha subunit. | 0.629 |
Arth_2304 | Arth_2306 | Arth_2304 | Arth_2306 | PFAM: protein of unknown function DUF28; KEGG: mbo:Mb2635c hypothetical protein. | PFAM: Mur ligase, middle domain protein; domain of unknown function DUF1727; KEGG: blo:BL0430 narrowly conserved hypothetical protein with Mur ligase domain. | 0.597 |
Arth_2304 | aspS | Arth_2304 | Arth_2291 | PFAM: protein of unknown function DUF28; KEGG: mbo:Mb2635c hypothetical protein. | aspartyl-tRNA synthetase; Aspartyl-tRNA synthetase with relaxed tRNA specificity since it is able to aspartylate not only its cognate tRNA(Asp) but also tRNA(Asn). Reaction proceeds in two steps: L-aspartate is first activated by ATP to form Asp-AMP and then transferred to the acceptor end of tRNA(Asp/Asn); Belongs to the class-II aminoacyl-tRNA synthetase family. Type 1 subfamily. | 0.649 |
Arth_2304 | pdxT | Arth_2304 | Arth_2305 | PFAM: protein of unknown function DUF28; KEGG: mbo:Mb2635c hypothetical protein. | Pyridoxal phosphate synthase yaaE subunit; Catalyzes the hydrolysis of glutamine to glutamate and ammonia as part of the biosynthesis of pyridoxal 5'-phosphate. The resulting ammonia molecule is channeled to the active site of PdxS. | 0.904 |
Arth_2304 | prfA | Arth_2304 | Arth_2619 | PFAM: protein of unknown function DUF28; KEGG: mbo:Mb2635c hypothetical protein. | Bacterial peptide chain release factor 1 (bRF-1); Peptide chain release factor 1 directs the termination of translation in response to the peptide chain termination codons UAG and UAA. | 0.626 |
Arth_2304 | rplS | Arth_2304 | Arth_2479 | PFAM: protein of unknown function DUF28; KEGG: mbo:Mb2635c hypothetical protein. | LSU ribosomal protein L19P; This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site. | 0.717 |
Arth_2304 | ruvA | Arth_2304 | Arth_2302 | PFAM: protein of unknown function DUF28; KEGG: mbo:Mb2635c hypothetical protein. | Holliday junction DNA helicase subunit RuvA; The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing. RuvA stimulates, in the presence of DNA, the weak ATPase activity of RuvB. | 0.739 |
Arth_2304 | ruvB | Arth_2304 | Arth_2301 | PFAM: protein of unknown function DUF28; KEGG: mbo:Mb2635c hypothetical protein. | Holliday junction DNA helicase subunit RuvB; The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing. | 0.795 |
Arth_2304 | ruvC | Arth_2304 | Arth_2303 | PFAM: protein of unknown function DUF28; KEGG: mbo:Mb2635c hypothetical protein. | Holliday junction endonuclease RuvC; Nuclease that resolves Holliday junction intermediates in genetic recombination. Cleaves the cruciform structure in supercoiled DNA by nicking to strands with the same polarity at sites symmetrically opposed at the junction in the homologous arms and leaves a 5'-terminal phosphate and a 3'-terminal hydroxyl group. | 0.848 |
Arth_2304 | tig | Arth_2304 | Arth_2406 | PFAM: protein of unknown function DUF28; KEGG: mbo:Mb2635c hypothetical protein. | Trigger factor; Involved in protein export. Acts as a chaperone by maintaining the newly synthesized protein in an open conformation. Functions as a peptidyl-prolyl cis-trans isomerase; Belongs to the FKBP-type PPIase family. Tig subfamily. | 0.611 |
Arth_2306 | Arth_2304 | Arth_2306 | Arth_2304 | PFAM: Mur ligase, middle domain protein; domain of unknown function DUF1727; KEGG: blo:BL0430 narrowly conserved hypothetical protein with Mur ligase domain. | PFAM: protein of unknown function DUF28; KEGG: mbo:Mb2635c hypothetical protein. | 0.597 |
Arth_2306 | pdxT | Arth_2306 | Arth_2305 | PFAM: Mur ligase, middle domain protein; domain of unknown function DUF1727; KEGG: blo:BL0430 narrowly conserved hypothetical protein with Mur ligase domain. | Pyridoxal phosphate synthase yaaE subunit; Catalyzes the hydrolysis of glutamine to glutamate and ammonia as part of the biosynthesis of pyridoxal 5'-phosphate. The resulting ammonia molecule is channeled to the active site of PdxS. | 0.563 |
Arth_2306 | ruvA | Arth_2306 | Arth_2302 | PFAM: Mur ligase, middle domain protein; domain of unknown function DUF1727; KEGG: blo:BL0430 narrowly conserved hypothetical protein with Mur ligase domain. | Holliday junction DNA helicase subunit RuvA; The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing. RuvA stimulates, in the presence of DNA, the weak ATPase activity of RuvB. | 0.428 |
Arth_2306 | ruvB | Arth_2306 | Arth_2301 | PFAM: Mur ligase, middle domain protein; domain of unknown function DUF1727; KEGG: blo:BL0430 narrowly conserved hypothetical protein with Mur ligase domain. | Holliday junction DNA helicase subunit RuvB; The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing. | 0.499 |
Arth_2306 | ruvC | Arth_2306 | Arth_2303 | PFAM: Mur ligase, middle domain protein; domain of unknown function DUF1727; KEGG: blo:BL0430 narrowly conserved hypothetical protein with Mur ligase domain. | Holliday junction endonuclease RuvC; Nuclease that resolves Holliday junction intermediates in genetic recombination. Cleaves the cruciform structure in supercoiled DNA by nicking to strands with the same polarity at sites symmetrically opposed at the junction in the homologous arms and leaves a 5'-terminal phosphate and a 3'-terminal hydroxyl group. | 0.499 |
aspS | Arth_2304 | Arth_2291 | Arth_2304 | aspartyl-tRNA synthetase; Aspartyl-tRNA synthetase with relaxed tRNA specificity since it is able to aspartylate not only its cognate tRNA(Asp) but also tRNA(Asn). Reaction proceeds in two steps: L-aspartate is first activated by ATP to form Asp-AMP and then transferred to the acceptor end of tRNA(Asp/Asn); Belongs to the class-II aminoacyl-tRNA synthetase family. Type 1 subfamily. | PFAM: protein of unknown function DUF28; KEGG: mbo:Mb2635c hypothetical protein. | 0.649 |
aspS | tig | Arth_2291 | Arth_2406 | aspartyl-tRNA synthetase; Aspartyl-tRNA synthetase with relaxed tRNA specificity since it is able to aspartylate not only its cognate tRNA(Asp) but also tRNA(Asn). Reaction proceeds in two steps: L-aspartate is first activated by ATP to form Asp-AMP and then transferred to the acceptor end of tRNA(Asp/Asn); Belongs to the class-II aminoacyl-tRNA synthetase family. Type 1 subfamily. | Trigger factor; Involved in protein export. Acts as a chaperone by maintaining the newly synthesized protein in an open conformation. Functions as a peptidyl-prolyl cis-trans isomerase; Belongs to the FKBP-type PPIase family. Tig subfamily. | 0.494 |
pdxT | Arth_2304 | Arth_2305 | Arth_2304 | Pyridoxal phosphate synthase yaaE subunit; Catalyzes the hydrolysis of glutamine to glutamate and ammonia as part of the biosynthesis of pyridoxal 5'-phosphate. The resulting ammonia molecule is channeled to the active site of PdxS. | PFAM: protein of unknown function DUF28; KEGG: mbo:Mb2635c hypothetical protein. | 0.904 |
pdxT | Arth_2306 | Arth_2305 | Arth_2306 | Pyridoxal phosphate synthase yaaE subunit; Catalyzes the hydrolysis of glutamine to glutamate and ammonia as part of the biosynthesis of pyridoxal 5'-phosphate. The resulting ammonia molecule is channeled to the active site of PdxS. | PFAM: Mur ligase, middle domain protein; domain of unknown function DUF1727; KEGG: blo:BL0430 narrowly conserved hypothetical protein with Mur ligase domain. | 0.563 |