STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Arth_3313PFAM: lipolytic enzyme, G-D-S-L family; KEGG: bld:BLi01373 YesT. (233 aa)    
Predicted Functional Partners:
Arth_3312
YesU; KEGG: bld:BLi01374 YesU.
 
  
 0.937
Arth_3679
PFAM: FG-GAP repeat protein; KEGG: bsu:BG12858 similar to hypothetical proteins from B. subtilis.
 
 0.857
Arth_3673
KEGG: sco:SCO1536 hypothetical protein.
 
 
 0.855
Arth_3316
Carbohydrate ABC transporter substrate-binding protein, CUT1 family; PFAM: extracellular solute-binding protein, family 1; KEGG: bsu:BG10434 putative multiple sugar transport system substrate-binding protein; TC 3.A.1.1.-.
 
     0.802
Arth_3315
Carbohydrate ABC transporter membrane protein 1, CUT1 family; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bsu:BG10435 putative multiple sugar transport system permease protein; TC 3.A.1.1.-.
 
     0.734
Arth_3314
Carbohydrate ABC transporter membrane protein 2, CUT1 family; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bld:BLi01386 transmembrane lipoprotein; RBL02384; TC 3.A.1.1.-.
 
     0.714
Arth_1125
KEGG: afm:Afu8g07270 hypothetical protein.
  
     0.700
Arth_2427
KEGG: rba:RB10144 endo-1,4-beta-xylanase B.
  
 0.639
Arth_3317
PFAM: protein of unknown function DUF624; KEGG: bld:BLi01375 YesV.
 
    0.569
Arth_1855
PFAM: glycosyl hydrolase, family 88; KEGG: bha:BH2054 unsaturated glucuronyl hydrolase.
 
    0.554
Your Current Organism:
Arthrobacter sp. FB24
NCBI taxonomy Id: 290399
Other names: A. sp. FB24
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