STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Arth_3976PFAM: fumarate lyase; KEGG: sma:SAV1315 putative aspartate ammonia-lyase. (471 aa)    
Predicted Functional Partners:
Arth_2997
L-aspartate aminotransferase apoenzyme; PFAM: aminotransferase, class I and II; KEGG: sma:SAV4907 putative aspartate aminotransferase.
    
 0.913
Arth_2559
KEGG: blo:BL1375 L-aspartate oxidase; TIGRFAM: L-aspartate oxidase; PFAM: fumarate reductase/succinate dehydrogenase flavoprotein domain protein; FAD dependent oxidoreductase; FAD-dependent pyridine nucleotide-disulphide oxidoreductase.
   
 0.911
Arth_1423
PFAM: aminotransferase, class I and II; KEGG: mth:MTH1894 aspartate aminotransferase homolog.
    
 0.910
argH
TIGRFAM: argininosuccinate lyase; PFAM: fumarate lyase; KEGG: tfu:Tfu_2051 argininosuccinate lyase.
     
 0.909
purA
Adenylosuccinate synthetase; Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP; Belongs to the adenylosuccinate synthetase family.
     
 0.907
Arth_3157
PFAM: aminotransferase, class I and II; KEGG: ade:Adeh_2315 aminotransferase, class I and II.
    
 0.906
Arth_3787
PFAM: aminotransferase, class I and II; KEGG: afm:Afu7g00690 aminotransferase, classes I and II family.
    
 0.906
Arth_4033
KEGG: lxx:Lxx25100 adenylosuccinate lyase; TIGRFAM: adenylosuccinate lyase; PFAM: fumarate lyase; Adenylosuccinate lyase C-terminal domain protein; Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily.
     
 0.905
pyrB
TIGRFAM: aspartate carbamoyltransferase; PFAM: aspartate/ornithine carbamoyltransferase, Asp/Orn-binding region; aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain; KEGG: lxx:Lxx11060 aspartate carbamoyltransferase; Belongs to the aspartate/ornithine carbamoyltransferase superfamily. ATCase family.
     
  0.900
Arth_3544
PFAM: fumarate lyase; KEGG: sma:SAV1315 putative aspartate ammonia-lyase.
  
  
 
0.900
Your Current Organism:
Arthrobacter sp. FB24
NCBI taxonomy Id: 290399
Other names: A. sp. FB24
Server load: low (24%) [HD]