STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
rsmG16S rRNA m(7)G-527 methyltransferase; Specifically methylates the N7 position of guanine in position 518 of 16S rRNA; Belongs to the methyltransferase superfamily. RNA methyltransferase RsmG family. (228 aa)    
Predicted Functional Partners:
Arth_4168
PFAM: single-stranded nucleic acid binding R3H domain protein; KEGG: pac:PPA2349 JAG-like protein.
  
  
 0.938
Arth_1324
KEGG: ehi:18.t00040 C2 domain protein, putative Pfam: C2 PROSITE: GLN_RICH PRO_RICH C2_DOMAIN_2.
  
  
 0.918
Arth_4169
PFAM: 60 kDa inner membrane insertion protein; KEGG: lxx:Lxx25270 preprotein translocase, YidC subunit.
  
  
 0.865
Arth_4166
Chromosome segregation ATPase; PFAM: Cobyrinic acid a,c-diamide synthase; KEGG: sma:SAV4309 putative partitioning or sporulation protein.
  
  
 0.862
Arth_4165
Chromosome segregation DNA-binding protein; TIGRFAM: parB-like partition proteins; PFAM: ParB domain protein nuclease; KEGG: sma:SAV4308 putative ParB homolog; Belongs to the ParB family.
  
  
 0.849
Arth_4170
Protein of unknown function DUF37; Could be involved in insertion of integral membrane proteins into the membrane; Belongs to the UPF0161 family.
  
    0.839
rpmH
PFAM: ribosomal protein L34; KEGG: sma:SAV4315 putative ribosomal protein L34; Belongs to the bacterial ribosomal protein bL34 family.
  
  
 0.822
rnpA
Ribonuclease P protein component; RNaseP catalyzes the removal of the 5'-leader sequence from pre-tRNA to produce the mature 5'-terminus. It can also cleave other RNA substrates such as 4.5S RNA. The protein component plays an auxiliary but essential role in vivo by binding to the 5'-leader sequence and broadening the substrate specificity of the ribozyme.
 
     0.817
frr
Ribosome recycling factor; Responsible for the release of ribosomes from messenger RNA at the termination of protein biosynthesis. May increase the efficiency of translation by recycling ribosomes from one round of translation to another; Belongs to the RRF family.
  
   
 0.726
rpoB
DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
   
  
 0.710
Your Current Organism:
Arthrobacter sp. FB24
NCBI taxonomy Id: 290399
Other names: A. sp. FB24
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