STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Jann_0071Response regulator receiver (CheY-like) modulated serine phosphatase. (426 aa)    
Predicted Functional Partners:
Jann_0070
Hpt domain protein.
 
 
 0.993
Jann_4052
Putative anti-sigma regulatory factor (serine/threonine protein kinase).
 
 
 0.992
Jann_4051
Anti-sigma-factor antagonist (STAS) domain protein.
 
 
 0.990
Jann_0265
Histidine kinase.
 
 
 0.983
Jann_3127
Hypothetical protein.
  
  
 0.977
Jann_2988
Histidine kinase.
 
 
 0.964
fliG
Flagellar motor switch protein FliG.
  
  
 0.939
flgJ
Flagellar protein FlgJ putative.
   
    0.935
Jann_3441
Hypothetical protein.
 
    0.933
Jann_2692
Hypothetical protein.
  
  
 0.932
Your Current Organism:
Jannaschia sp. CCS1
NCBI taxonomy Id: 290400
Other names: J. sp. CCS1
Server load: medium (52%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.