STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Jann_1611Serine/threonine protein kinase. (1198 aa)    
Predicted Functional Partners:
Jann_1606
Protein serine/threonine phosphatase.
 
 
 0.903
Jann_4143
Protein serine/threonine phosphatase.
 
 
 0.903
Jann_3036
Hypothetical protein.
 
 
 0.872
Jann_4142
FHA domain containing protein.
 
 
 
 0.862
Jann_1605
FHA domain containing protein.
 
 
 
 0.861
Jann_1510
Condensin subunit ScpA; Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpB that pull DNA away from mid-cell into both cell halves.
  
 
 0.760
Jann_1612
Serine/threonine protein kinase.
 
  
0.750
Jann_4146
Hypothetical protein.
 
   
 0.735
polA
DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family.
  
 
 0.717
cheR
MCP methyltransferase/methylesterase, CheR/CheB with PAS/PAC sensor.
     
 0.712
Your Current Organism:
Jannaschia sp. CCS1
NCBI taxonomy Id: 290400
Other names: J. sp. CCS1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.