Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Jann_1764 | Jann_2411 | Jann_1764 | Jann_2411 | Glyoxalase/bleomycin resistance protein/dioxygenase. | Protein of unknown function DUF1470. | 0.499 |
Jann_1951 | Jann_2270 | Jann_1951 | Jann_2270 | PfkB. | Hypothetical protein. | 0.416 |
Jann_1951 | Jann_2411 | Jann_1951 | Jann_2411 | PfkB. | Protein of unknown function DUF1470. | 0.542 |
Jann_2270 | Jann_1951 | Jann_2270 | Jann_1951 | Hypothetical protein. | PfkB. | 0.416 |
Jann_2270 | Jann_2411 | Jann_2270 | Jann_2411 | Hypothetical protein. | Protein of unknown function DUF1470. | 0.406 |
Jann_2304 | Jann_2411 | Jann_2304 | Jann_2411 | Helix-turn-helix type 11. | Protein of unknown function DUF1470. | 0.445 |
Jann_2410 | Jann_2411 | Jann_2410 | Jann_2411 | Protein of unknown function DUF6 transmembrane. | Protein of unknown function DUF1470. | 0.836 |
Jann_2410 | Jann_2412 | Jann_2410 | Jann_2412 | Protein of unknown function DUF6 transmembrane. | Transcriptional regulator, ArsR family. | 0.763 |
Jann_2410 | tetR | Jann_2410 | Jann_4166 | Protein of unknown function DUF6 transmembrane. | Transcriptional regulator, TetR family. | 0.639 |
Jann_2411 | Jann_1764 | Jann_2411 | Jann_1764 | Protein of unknown function DUF1470. | Glyoxalase/bleomycin resistance protein/dioxygenase. | 0.499 |
Jann_2411 | Jann_1951 | Jann_2411 | Jann_1951 | Protein of unknown function DUF1470. | PfkB. | 0.542 |
Jann_2411 | Jann_2270 | Jann_2411 | Jann_2270 | Protein of unknown function DUF1470. | Hypothetical protein. | 0.406 |
Jann_2411 | Jann_2304 | Jann_2411 | Jann_2304 | Protein of unknown function DUF1470. | Helix-turn-helix type 11. | 0.445 |
Jann_2411 | Jann_2410 | Jann_2411 | Jann_2410 | Protein of unknown function DUF1470. | Protein of unknown function DUF6 transmembrane. | 0.836 |
Jann_2411 | Jann_2412 | Jann_2411 | Jann_2412 | Protein of unknown function DUF1470. | Transcriptional regulator, ArsR family. | 0.810 |
Jann_2411 | Jann_2413 | Jann_2411 | Jann_2413 | Protein of unknown function DUF1470. | Hypothetical protein. | 0.495 |
Jann_2411 | Jann_2459 | Jann_2411 | Jann_2459 | Protein of unknown function DUF1470. | NAD-dependent epimerase/dehydratase. | 0.514 |
Jann_2411 | tetR | Jann_2411 | Jann_4166 | Protein of unknown function DUF1470. | Transcriptional regulator, TetR family. | 0.639 |
Jann_2412 | Jann_2410 | Jann_2412 | Jann_2410 | Transcriptional regulator, ArsR family. | Protein of unknown function DUF6 transmembrane. | 0.763 |
Jann_2412 | Jann_2411 | Jann_2412 | Jann_2411 | Transcriptional regulator, ArsR family. | Protein of unknown function DUF1470. | 0.810 |
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