STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Jann_3020annotation not available (738 aa)    
Predicted Functional Partners:
Jann_3036
annotation not available
 
  
 0.939
Jann_3022
annotation not available
 
   
 0.924
Jann_3034
annotation not available
 
  
 0.906
Jann_3023
annotation not available
 
  
 0.905
Jann_3035
annotation not available
 
  
 0.898
Jann_3030
annotation not available
 
  
 0.897
Jann_3033
annotation not available
 
  
 0.897
Jann_3026
annotation not available
 
   
 0.887
Jann_3031
annotation not available
 
  
 0.883
Jann_3024
annotation not available
 
   
 0.882
Your Current Organism:
Jannaschia sp. CCS1
NCBI taxonomy Id: 290400
Other names: J. sp. CCS1, Jannaschia sp. CCS1
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