STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Jann_3032FHA domain containing protein. (416 aa)    
Predicted Functional Partners:
Jann_3036
Hypothetical protein.
       0.790
Jann_3029
Protein of unknown function DUF1316.
       0.781
Jann_3030
Protein of unknown function DUF879.
       0.781
Jann_3031
Protein of unknown function DUF1305.
       0.781
Jann_3033
Protein of unknown function DUF876.
       0.780
Jann_3034
OmpA/MotB.
       0.780
Jann_3035
ImcF-related protein.
       0.780
Jann_3028
Virulence protein SciE type.
       0.779
Jann_3025
Uncharacterized conserved protein UCP028301.
       0.776
Jann_3026
Protein of unknown function DUF877.
       0.773
Your Current Organism:
Jannaschia sp. CCS1
NCBI taxonomy Id: 290400
Other names: J. sp. CCS1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.