STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
gcvPGlycine dehydrogenase; The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein; Belongs to the GcvP family. (943 aa)    
Predicted Functional Partners:
Jann_3620
Glycine cleavage system T protein.
 0.999
gcvH
Glycine cleavage system H protein; The glycine cleavage system catalyzes the degradation of glycine. The H protein shuttles the methylamine group of glycine from the P protein to the T protein.
 
 0.999
Jann_2186
Sarcosine oxidase alpha subunit family; Belongs to the GcvT family.
 
 0.997
Jann_2079
Serine hydroxymethyltransferase.
  
 
 0.996
glyA
Serine hydroxymethyltransferase; Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF-independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism.
  
 
 0.996
Jann_3447
Sarcosine oxidase alpha subunit family; Belongs to the GcvT family.
 
 
 0.976
Jann_2379
Glycine cleavage T protein (aminomethyl transferase); Belongs to the GcvT family.
 
 0.973
Jann_1481
FAD dependent oxidoreductase; Belongs to the GcvT family.
 
 
 0.970
Jann_1596
Dimethylglycine dehydrogenase; Belongs to the GcvT family.
 
 
 0.970
Jann_2488
Dimethylglycine dehydrogenase; Belongs to the GcvT family.
 
 
 0.970
Your Current Organism:
Jannaschia sp. CCS1
NCBI taxonomy Id: 290400
Other names: J. sp. CCS1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.