Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
GOX1656 | GOX1658 | GOX1656 | GOX1658 | Hypothetical protein. | Hypothetical protein. | 0.432 |
GOX1656 | GOX1659 | GOX1656 | GOX1659 | Hypothetical protein. | Hypothetical protein. | 0.432 |
GOX1656 | aat | GOX1656 | GOX1657 | Hypothetical protein. | Leucyl/phenylalanyl-tRNA--protein transferase; Functions in the N-end rule pathway of protein degradation where it conjugates Leu, Phe and, less efficiently, Met from aminoacyl- tRNAs to the N-termini of proteins containing an N-terminal arginine or lysine. | 0.432 |
GOX1658 | GOX1656 | GOX1658 | GOX1656 | Hypothetical protein. | Hypothetical protein. | 0.432 |
GOX1658 | GOX1659 | GOX1658 | GOX1659 | Hypothetical protein. | Hypothetical protein. | 0.919 |
GOX1658 | GOX1660 | GOX1658 | GOX1660 | Hypothetical protein. | Hypothetical protein. | 0.463 |
GOX1658 | aat | GOX1658 | GOX1657 | Hypothetical protein. | Leucyl/phenylalanyl-tRNA--protein transferase; Functions in the N-end rule pathway of protein degradation where it conjugates Leu, Phe and, less efficiently, Met from aminoacyl- tRNAs to the N-termini of proteins containing an N-terminal arginine or lysine. | 0.793 |
GOX1659 | GOX1656 | GOX1659 | GOX1656 | Hypothetical protein. | Hypothetical protein. | 0.432 |
GOX1659 | GOX1658 | GOX1659 | GOX1658 | Hypothetical protein. | Hypothetical protein. | 0.919 |
GOX1659 | GOX1660 | GOX1659 | GOX1660 | Hypothetical protein. | Hypothetical protein. | 0.463 |
GOX1659 | aat | GOX1659 | GOX1657 | Hypothetical protein. | Leucyl/phenylalanyl-tRNA--protein transferase; Functions in the N-end rule pathway of protein degradation where it conjugates Leu, Phe and, less efficiently, Met from aminoacyl- tRNAs to the N-termini of proteins containing an N-terminal arginine or lysine. | 0.781 |
GOX1660 | GOX1658 | GOX1660 | GOX1658 | Hypothetical protein. | Hypothetical protein. | 0.463 |
GOX1660 | GOX1659 | GOX1660 | GOX1659 | Hypothetical protein. | Hypothetical protein. | 0.463 |
GOX1660 | aat | GOX1660 | GOX1657 | Hypothetical protein. | Leucyl/phenylalanyl-tRNA--protein transferase; Functions in the N-end rule pathway of protein degradation where it conjugates Leu, Phe and, less efficiently, Met from aminoacyl- tRNAs to the N-termini of proteins containing an N-terminal arginine or lysine. | 0.463 |
aat | GOX1656 | GOX1657 | GOX1656 | Leucyl/phenylalanyl-tRNA--protein transferase; Functions in the N-end rule pathway of protein degradation where it conjugates Leu, Phe and, less efficiently, Met from aminoacyl- tRNAs to the N-termini of proteins containing an N-terminal arginine or lysine. | Hypothetical protein. | 0.432 |
aat | GOX1658 | GOX1657 | GOX1658 | Leucyl/phenylalanyl-tRNA--protein transferase; Functions in the N-end rule pathway of protein degradation where it conjugates Leu, Phe and, less efficiently, Met from aminoacyl- tRNAs to the N-termini of proteins containing an N-terminal arginine or lysine. | Hypothetical protein. | 0.793 |
aat | GOX1659 | GOX1657 | GOX1659 | Leucyl/phenylalanyl-tRNA--protein transferase; Functions in the N-end rule pathway of protein degradation where it conjugates Leu, Phe and, less efficiently, Met from aminoacyl- tRNAs to the N-termini of proteins containing an N-terminal arginine or lysine. | Hypothetical protein. | 0.781 |
aat | GOX1660 | GOX1657 | GOX1660 | Leucyl/phenylalanyl-tRNA--protein transferase; Functions in the N-end rule pathway of protein degradation where it conjugates Leu, Phe and, less efficiently, Met from aminoacyl- tRNAs to the N-termini of proteins containing an N-terminal arginine or lysine. | Hypothetical protein. | 0.463 |
aat | bpt | GOX1657 | GOX0072 | Leucyl/phenylalanyl-tRNA--protein transferase; Functions in the N-end rule pathway of protein degradation where it conjugates Leu, Phe and, less efficiently, Met from aminoacyl- tRNAs to the N-termini of proteins containing an N-terminal arginine or lysine. | Arginine-tRNA-protein transferase; Functions in the N-end rule pathway of protein degradation where it conjugates Leu from its aminoacyl-tRNA to the N-termini of proteins containing an N-terminal aspartate or glutamate. Belongs to the R-transferase family. Bpt subfamily. | 0.686 |
aat | clpS | GOX1657 | GOX0608 | Leucyl/phenylalanyl-tRNA--protein transferase; Functions in the N-end rule pathway of protein degradation where it conjugates Leu, Phe and, less efficiently, Met from aminoacyl- tRNAs to the N-termini of proteins containing an N-terminal arginine or lysine. | Hypothetical protein; Involved in the modulation of the specificity of the ClpAP- mediated ATP-dependent protein degradation; Belongs to the ClpS family. | 0.769 |
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