STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TMPRSS13Transmembrane protease serine 13; Belongs to the peptidase S1 family. (506 aa)    
Predicted Functional Partners:
SLC13A2
Solute carrier family 13 member 2.
   
  
 0.642
SLC46A2
Thymic stromal cotransporter homolog.
   
  
 0.638
SLC44A3
Choline transporter-like protein 3 isoform X1; Belongs to the CTL (choline transporter-like) family.
   
  
 0.573
MET
Hepatocyte growth factor receptor.
    
 0.532
MST1R
Macrophage-stimulating protein receptor.
    
 0.532
SLC36A2
Proton-coupled amino acid transporter 2.
   
  
 0.523
SLC26A7
Anion exchange transporter.
      
 0.522
SLC5A8
Sodium-coupled monocarboxylate transporter 1; Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family.
      
 0.516
SERPINB7
Serpin B7 isoform X2; Belongs to the serpin family.
    
 0.503
SERPINB11
Serpin family B member 11 (gene/pseudogene); Belongs to the serpin family.
    
 0.503
Your Current Organism:
Ursus maritimus
NCBI taxonomy Id: 29073
Other names: Thalarctos maritimus, U. maritimus, polar bear, white bear
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.