Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
PAU_00272 | PAU_00273 | PAU_00272 | PAU_00273 | Conserved hypothetical protein. | Conserved hypothetical protein. | 0.871 |
PAU_00272 | PAU_00281 | PAU_00272 | PAU_00281 | Conserved hypothetical protein. | Conserved hypothetical protein. | 0.438 |
PAU_00272 | PAU_00284 | PAU_00272 | PAU_00284 | Conserved hypothetical protein. | Conserved hypothetical protein. | 0.495 |
PAU_00272 | PAU_00285 | PAU_00272 | PAU_00285 | Conserved hypothetical protein. | Conserved hypothetical protein. | 0.560 |
PAU_00272 | PAU_00286 | PAU_00272 | PAU_00286 | Conserved hypothetical protein. | Conserved hypothetical protein. | 0.599 |
PAU_00272 | PAU_00287 | PAU_00272 | PAU_00287 | Conserved hypothetical protein. | Conserved hypothetical protein. | 0.597 |
PAU_00272 | PAU_00288 | PAU_00272 | PAU_00288 | Conserved hypothetical protein. | Conserved hypothetical protein. | 0.583 |
PAU_00272 | pmt1 | PAU_00272 | PAU_00275 | Conserved hypothetical protein. | Conserved hypothetical protein; This entry represents a conserved region within several bacterial proteins that resemble ImcF, which has been proposed to be involved in cell surface reorganisation, resulting in increased adherence to epithelial cells and increased conjugation frequency. | 0.534 |
PAU_00273 | PAU_00272 | PAU_00273 | PAU_00272 | Conserved hypothetical protein. | Conserved hypothetical protein. | 0.871 |
PAU_00273 | PAU_00280 | PAU_00273 | PAU_00280 | Conserved hypothetical protein. | Putative membrane Protein. | 0.863 |
PAU_00273 | PAU_00281 | PAU_00273 | PAU_00281 | Conserved hypothetical protein. | Conserved hypothetical protein. | 0.857 |
PAU_00273 | PAU_00284 | PAU_00273 | PAU_00284 | Conserved hypothetical protein. | Conserved hypothetical protein. | 0.885 |
PAU_00273 | PAU_00285 | PAU_00273 | PAU_00285 | Conserved hypothetical protein. | Conserved hypothetical protein. | 0.849 |
PAU_00273 | PAU_00286 | PAU_00273 | PAU_00286 | Conserved hypothetical protein. | Conserved hypothetical protein. | 0.849 |
PAU_00273 | PAU_00287 | PAU_00273 | PAU_00287 | Conserved hypothetical protein. | Conserved hypothetical protein. | 0.914 |
PAU_00273 | PAU_00288 | PAU_00273 | PAU_00288 | Conserved hypothetical protein. | Conserved hypothetical protein. | 0.920 |
PAU_00273 | PAU_02282 | PAU_00273 | PAU_02282 | Conserved hypothetical protein. | Conserved hypothetical protein. | 0.832 |
PAU_00273 | pmt1 | PAU_00273 | PAU_00275 | Conserved hypothetical protein. | Conserved hypothetical protein; This entry represents a conserved region within several bacterial proteins that resemble ImcF, which has been proposed to be involved in cell surface reorganisation, resulting in increased adherence to epithelial cells and increased conjugation frequency. | 0.876 |
PAU_00280 | PAU_00273 | PAU_00280 | PAU_00273 | Putative membrane Protein. | Conserved hypothetical protein. | 0.863 |
PAU_00280 | PAU_00281 | PAU_00280 | PAU_00281 | Putative membrane Protein. | Conserved hypothetical protein. | 0.958 |
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