STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PAU_00434Conserved hypothetical protein. (221 aa)    
Predicted Functional Partners:
PAU_00433
Conserved hypothetical protein; Probable transcriptional regulator protein.
 
     0.825
yegQ
Similar to putative protease yegq of escherichia coli.
  
  
 0.627
syrE-2
Complete genome; Antibiotic synthesis; syringomycin synthetase.
 
 
 0.583
sypC2
Syringopeptin synthetase; Belongs to the ATP-dependent AMP-binding enzyme family.
  
 
 0.524
PAU_02206
Transcriptional regulator, AraC family.
  
     0.501
PAU_01231
Conserved hypothetical protein.
  
     0.490
PAU_00454
Putative polyketide synthase; Nvolved in the biosynthesis of a polyketide antibiotic; polyketide antibiotic synthase enzyme systems.
 
 
 0.484
PAU_00871
Conserved hypothetical protein.
   
    0.457
PAU_02203
Similar to d-aminopeptidase.
  
     0.445
PAU_00756
Conserved hypothetical protein.
  
     0.436
Your Current Organism:
Photorhabdus asymbiotica
NCBI taxonomy Id: 291112
Other names: ATCC 43950, CIP 106331, DSM 15149, P. asymbiotica, strain 3265-86
Server load: low (20%) [HD]