Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
PAU_00433 | PAU_00434 | PAU_00433 | PAU_00434 | Conserved hypothetical protein; Probable transcriptional regulator protein. | Conserved hypothetical protein. | 0.825 |
PAU_00433 | PAU_01231 | PAU_00433 | PAU_01231 | Conserved hypothetical protein; Probable transcriptional regulator protein. | Conserved hypothetical protein. | 0.527 |
PAU_00433 | PAU_02206 | PAU_00433 | PAU_02206 | Conserved hypothetical protein; Probable transcriptional regulator protein. | Transcriptional regulator, AraC family. | 0.557 |
PAU_00433 | syrE-2 | PAU_00433 | PAU_02675 | Conserved hypothetical protein; Probable transcriptional regulator protein. | Complete genome; Antibiotic synthesis; syringomycin synthetase. | 0.459 |
PAU_00434 | PAU_00433 | PAU_00434 | PAU_00433 | Conserved hypothetical protein. | Conserved hypothetical protein; Probable transcriptional regulator protein. | 0.825 |
PAU_00434 | PAU_00454 | PAU_00434 | PAU_00454 | Conserved hypothetical protein. | Putative polyketide synthase; Nvolved in the biosynthesis of a polyketide antibiotic; polyketide antibiotic synthase enzyme systems. | 0.484 |
PAU_00434 | PAU_00756 | PAU_00434 | PAU_00756 | Conserved hypothetical protein. | Conserved hypothetical protein. | 0.436 |
PAU_00434 | PAU_00871 | PAU_00434 | PAU_00871 | Conserved hypothetical protein. | Conserved hypothetical protein. | 0.457 |
PAU_00434 | PAU_01231 | PAU_00434 | PAU_01231 | Conserved hypothetical protein. | Conserved hypothetical protein. | 0.490 |
PAU_00434 | PAU_02203 | PAU_00434 | PAU_02203 | Conserved hypothetical protein. | Similar to d-aminopeptidase. | 0.445 |
PAU_00434 | PAU_02206 | PAU_00434 | PAU_02206 | Conserved hypothetical protein. | Transcriptional regulator, AraC family. | 0.501 |
PAU_00434 | sypC2 | PAU_00434 | PAU_02221 | Conserved hypothetical protein. | Syringopeptin synthetase; Belongs to the ATP-dependent AMP-binding enzyme family. | 0.524 |
PAU_00434 | syrE-2 | PAU_00434 | PAU_02675 | Conserved hypothetical protein. | Complete genome; Antibiotic synthesis; syringomycin synthetase. | 0.583 |
PAU_00434 | yegQ | PAU_00434 | PAU_01762 | Conserved hypothetical protein. | Similar to putative protease yegq of escherichia coli. | 0.627 |
PAU_00454 | PAU_00434 | PAU_00454 | PAU_00434 | Putative polyketide synthase; Nvolved in the biosynthesis of a polyketide antibiotic; polyketide antibiotic synthase enzyme systems. | Conserved hypothetical protein. | 0.484 |
PAU_00454 | sypC2 | PAU_00454 | PAU_02221 | Putative polyketide synthase; Nvolved in the biosynthesis of a polyketide antibiotic; polyketide antibiotic synthase enzyme systems. | Syringopeptin synthetase; Belongs to the ATP-dependent AMP-binding enzyme family. | 0.997 |
PAU_00454 | syrE-2 | PAU_00454 | PAU_02675 | Putative polyketide synthase; Nvolved in the biosynthesis of a polyketide antibiotic; polyketide antibiotic synthase enzyme systems. | Complete genome; Antibiotic synthesis; syringomycin synthetase. | 0.997 |
PAU_00756 | PAU_00434 | PAU_00756 | PAU_00434 | Conserved hypothetical protein. | Conserved hypothetical protein. | 0.436 |
PAU_00756 | syrE-2 | PAU_00756 | PAU_02675 | Conserved hypothetical protein. | Complete genome; Antibiotic synthesis; syringomycin synthetase. | 0.504 |
PAU_00871 | PAU_00434 | PAU_00871 | PAU_00434 | Conserved hypothetical protein. | Conserved hypothetical protein. | 0.457 |
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