node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
PAU_01915 | nudL | PAU_01915 | PAU_01840 | Conserved hypothetical protein; Belongs to the enoyl-CoA hydratase/isomerase family. | Conserved hypothetical protein; Belongs to the Nudix hydrolase family. PCD1 subfamily. | 0.536 |
birA | nudL | PAU_04224 | PAU_01840 | Bifunctional protein [includes: biotin operon repressor; Acts both as a biotin--[acetyl-CoA-carboxylase] ligase and a biotin-operon repressor. In the presence of ATP, BirA activates biotin to form the BirA-biotinyl-5'-adenylate (BirA-bio-5'-AMP or holoBirA) complex. HoloBirA can either transfer the biotinyl moiety to the biotin carboxyl carrier protein (BCCP) subunit of acetyl-CoA carboxylase, or bind to the biotin operator site and inhibit transcription of the operon. | Conserved hypothetical protein; Belongs to the Nudix hydrolase family. PCD1 subfamily. | 0.581 |
nudL | PAU_01915 | PAU_01840 | PAU_01915 | Conserved hypothetical protein; Belongs to the Nudix hydrolase family. PCD1 subfamily. | Conserved hypothetical protein; Belongs to the enoyl-CoA hydratase/isomerase family. | 0.536 |
nudL | birA | PAU_01840 | PAU_04224 | Conserved hypothetical protein; Belongs to the Nudix hydrolase family. PCD1 subfamily. | Bifunctional protein [includes: biotin operon repressor; Acts both as a biotin--[acetyl-CoA-carboxylase] ligase and a biotin-operon repressor. In the presence of ATP, BirA activates biotin to form the BirA-biotinyl-5'-adenylate (BirA-bio-5'-AMP or holoBirA) complex. HoloBirA can either transfer the biotinyl moiety to the biotin carboxyl carrier protein (BCCP) subunit of acetyl-CoA carboxylase, or bind to the biotin operator site and inhibit transcription of the operon. | 0.581 |
nudL | pabB | PAU_01840 | PAU_01841 | Conserved hypothetical protein; Belongs to the Nudix hydrolase family. PCD1 subfamily. | Para-aminobenzoate synthase component I. | 0.794 |
nudL | rnr | PAU_01840 | PAU_04074 | Conserved hypothetical protein; Belongs to the Nudix hydrolase family. PCD1 subfamily. | Ribonuclease r (rnase r) (vacb protein); 3'-5' exoribonuclease that releases 5'-nucleoside monophosphates and is involved in maturation of structured RNAs. Belongs to the RNR ribonuclease family. RNase R subfamily. | 0.538 |
nudL | rph | PAU_01840 | PAU_04378 | Conserved hypothetical protein; Belongs to the Nudix hydrolase family. PCD1 subfamily. | Ribonuclease ph; Phosphorolytic 3'-5' exoribonuclease that plays an important role in tRNA 3'-end maturation. Removes nucleotide residues following the 3'-CCA terminus of tRNAs; can also add nucleotides to the ends of RNA molecules by using nucleoside diphosphates as substrates, but this may not be physiologically important. Probably plays a role in initiation of 16S rRNA degradation (leading to ribosome degradation) during starvation. | 0.407 |
nudL | sdaA | PAU_01840 | PAU_01839 | Conserved hypothetical protein; Belongs to the Nudix hydrolase family. PCD1 subfamily. | L-serine dehydratase 1; Belongs to the iron-sulfur dependent L-serine dehydratase family. | 0.525 |
nudL | yoaH | PAU_01840 | PAU_01842 | Conserved hypothetical protein; Belongs to the Nudix hydrolase family. PCD1 subfamily. | Conserved hypothetical protein; Belongs to the UPF0181 family. | 0.571 |
pabB | nudL | PAU_01841 | PAU_01840 | Para-aminobenzoate synthase component I. | Conserved hypothetical protein; Belongs to the Nudix hydrolase family. PCD1 subfamily. | 0.794 |
pabB | sdaA | PAU_01841 | PAU_01839 | Para-aminobenzoate synthase component I. | L-serine dehydratase 1; Belongs to the iron-sulfur dependent L-serine dehydratase family. | 0.495 |
pabB | yoaH | PAU_01841 | PAU_01842 | Para-aminobenzoate synthase component I. | Conserved hypothetical protein; Belongs to the UPF0181 family. | 0.573 |
rnr | nudL | PAU_04074 | PAU_01840 | Ribonuclease r (rnase r) (vacb protein); 3'-5' exoribonuclease that releases 5'-nucleoside monophosphates and is involved in maturation of structured RNAs. Belongs to the RNR ribonuclease family. RNase R subfamily. | Conserved hypothetical protein; Belongs to the Nudix hydrolase family. PCD1 subfamily. | 0.538 |
rnr | rph | PAU_04074 | PAU_04378 | Ribonuclease r (rnase r) (vacb protein); 3'-5' exoribonuclease that releases 5'-nucleoside monophosphates and is involved in maturation of structured RNAs. Belongs to the RNR ribonuclease family. RNase R subfamily. | Ribonuclease ph; Phosphorolytic 3'-5' exoribonuclease that plays an important role in tRNA 3'-end maturation. Removes nucleotide residues following the 3'-CCA terminus of tRNAs; can also add nucleotides to the ends of RNA molecules by using nucleoside diphosphates as substrates, but this may not be physiologically important. Probably plays a role in initiation of 16S rRNA degradation (leading to ribosome degradation) during starvation. | 0.918 |
rph | nudL | PAU_04378 | PAU_01840 | Ribonuclease ph; Phosphorolytic 3'-5' exoribonuclease that plays an important role in tRNA 3'-end maturation. Removes nucleotide residues following the 3'-CCA terminus of tRNAs; can also add nucleotides to the ends of RNA molecules by using nucleoside diphosphates as substrates, but this may not be physiologically important. Probably plays a role in initiation of 16S rRNA degradation (leading to ribosome degradation) during starvation. | Conserved hypothetical protein; Belongs to the Nudix hydrolase family. PCD1 subfamily. | 0.407 |
rph | rnr | PAU_04378 | PAU_04074 | Ribonuclease ph; Phosphorolytic 3'-5' exoribonuclease that plays an important role in tRNA 3'-end maturation. Removes nucleotide residues following the 3'-CCA terminus of tRNAs; can also add nucleotides to the ends of RNA molecules by using nucleoside diphosphates as substrates, but this may not be physiologically important. Probably plays a role in initiation of 16S rRNA degradation (leading to ribosome degradation) during starvation. | Ribonuclease r (rnase r) (vacb protein); 3'-5' exoribonuclease that releases 5'-nucleoside monophosphates and is involved in maturation of structured RNAs. Belongs to the RNR ribonuclease family. RNase R subfamily. | 0.918 |
sdaA | nudL | PAU_01839 | PAU_01840 | L-serine dehydratase 1; Belongs to the iron-sulfur dependent L-serine dehydratase family. | Conserved hypothetical protein; Belongs to the Nudix hydrolase family. PCD1 subfamily. | 0.525 |
sdaA | pabB | PAU_01839 | PAU_01841 | L-serine dehydratase 1; Belongs to the iron-sulfur dependent L-serine dehydratase family. | Para-aminobenzoate synthase component I. | 0.495 |
yoaH | nudL | PAU_01842 | PAU_01840 | Conserved hypothetical protein; Belongs to the UPF0181 family. | Conserved hypothetical protein; Belongs to the Nudix hydrolase family. PCD1 subfamily. | 0.571 |
yoaH | pabB | PAU_01842 | PAU_01841 | Conserved hypothetical protein; Belongs to the UPF0181 family. | Para-aminobenzoate synthase component I. | 0.573 |