STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PAU_03792Conserved hypothetical Protein. (173 aa)    
Predicted Functional Partners:
PAU_02280
Conserved hypothetical protein.
  
  
  0.976
PAU_03790
Conserved hypothetical Protein.
 
 
 0.971
PAU_03791
Conserved hypothetical Protein.
 
 
 0.950
PAU_03789
Conserved hypothetical Protein.
 
  
 0.947
PAU_03787
Outer membrane protein, ompa/motb family; Most of the bacterial outer membrane proteins in this group are porin-like integral membrane proteins.
 
  
 0.918
PAU_00289
Conserved hypothetical protein.
     
  0.900
PAU_02414
Conserved hypothetical protein.
     
  0.900
PAU_03050
Conserved hypothetical protein.
     
  0.900
PAU_03056
Conserved hypothetical protein.
     
  0.900
PAU_03833
Conserved hypothetical protein.
     
  0.900
Your Current Organism:
Photorhabdus asymbiotica
NCBI taxonomy Id: 291112
Other names: ATCC 43950, CIP 106331, DSM 15149, P. asymbiotica, strain 3265-86
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.