STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PAU_03798Conserved hypothetical protein; Belongs to the ClpA/ClpB family. (874 aa)    
Predicted Functional Partners:
PAU_03799
Conserved hypothetical Protein.
 
    0.889
PAU_03800
Conserved hypothetical Protein.
 
  
 0.869
PAU_03801
Conserved hypothetical Protein.
 
  
 0.842
clpP
ATP-dependent proteolytic subunit of clpA-ClpP serine protease, heat shock protein F21.5; Cleaves peptides in various proteins in a process that requires ATP hydrolysis. Has a chymotrypsin-like activity. Plays a major role in the degradation of misfolded proteins. Belongs to the peptidase S14 family.
 
 
 0.838
dnaK
Chaperone hsp70, autoregulated heat shock protein; Acts as a chaperone; Belongs to the heat shock protein 70 family.
  
 
 0.809
barA
Signal transduction histidine-protein kinase.
 
 
 
 0.800
PAU_03805
Conserved hypothetical Protein.
 
    0.794
PAU_03791
Conserved hypothetical Protein.
 
 
 0.736
clpS
Atp-dependent clp protease adaptor protein clps; Involved in the modulation of the specificity of the ClpAP- mediated ATP-dependent protein degradation; Belongs to the ClpS family.
  
 
 0.721
PAU_03790
Conserved hypothetical Protein.
 
  
 0.718
Your Current Organism:
Photorhabdus asymbiotica
NCBI taxonomy Id: 291112
Other names: ATCC 43950, CIP 106331, DSM 15149, P. asymbiotica, strain 3265-86
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.