Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 annotation | node2 annotation | score |
PAU_02273 | PAU_02280 | Putative inner membrane protein. | Conserved hypothetical protein. | 0.944 |
PAU_02273 | PAU_03787 | Putative inner membrane protein. | Outer membrane protein, ompa/motb family; Most of the bacterial outer membrane proteins in this group are porin-like integral membrane proteins. | 0.641 |
PAU_02273 | PAU_03790 | Putative inner membrane protein. | Conserved hypothetical Protein. | 0.884 |
PAU_02273 | PAU_03792 | Putative inner membrane protein. | Conserved hypothetical Protein. | 0.867 |
PAU_02273 | PAU_03798 | Putative inner membrane protein. | Conserved hypothetical protein; Belongs to the ClpA/ClpB family. | 0.677 |
PAU_02273 | PAU_03799 | Putative inner membrane protein. | Conserved hypothetical Protein. | 0.884 |
PAU_02273 | PAU_03800 | Putative inner membrane protein. | Conserved hypothetical Protein. | 0.811 |
PAU_02273 | PAU_03801 | Putative inner membrane protein. | Conserved hypothetical Protein. | 0.694 |
PAU_02273 | PAU_03805 | Putative inner membrane protein. | Conserved hypothetical Protein. | 0.831 |
PAU_02280 | PAU_02273 | Conserved hypothetical protein. | Putative inner membrane protein. | 0.944 |
PAU_02280 | PAU_03787 | Conserved hypothetical protein. | Outer membrane protein, ompa/motb family; Most of the bacterial outer membrane proteins in this group are porin-like integral membrane proteins. | 0.795 |
PAU_02280 | PAU_03789 | Conserved hypothetical protein. | Conserved hypothetical Protein. | 0.897 |
PAU_02280 | PAU_03790 | Conserved hypothetical protein. | Conserved hypothetical Protein. | 0.901 |
PAU_02280 | PAU_03792 | Conserved hypothetical protein. | Conserved hypothetical Protein. | 0.976 |
PAU_02280 | PAU_03798 | Conserved hypothetical protein. | Conserved hypothetical protein; Belongs to the ClpA/ClpB family. | 0.700 |
PAU_02280 | PAU_03799 | Conserved hypothetical protein. | Conserved hypothetical Protein. | 0.872 |
PAU_02280 | PAU_03800 | Conserved hypothetical protein. | Conserved hypothetical Protein. | 0.811 |
PAU_02280 | PAU_03801 | Conserved hypothetical protein. | Conserved hypothetical Protein. | 0.829 |
PAU_02280 | PAU_03805 | Conserved hypothetical protein. | Conserved hypothetical Protein. | 0.815 |
PAU_03787 | PAU_02273 | Outer membrane protein, ompa/motb family; Most of the bacterial outer membrane proteins in this group are porin-like integral membrane proteins. | Putative inner membrane protein. | 0.641 |
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