STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TUBRATIS_25890Ribosomal S6. (125 aa)    
Predicted Functional Partners:
TUBRATIS_17570
Nop56p-like nucleolar protein.
   
 0.999
TUBRATIS_15650
Nop5-like nucleolar protein.
   
 0.997
TUBRATIS_12390
Fibrillarin.
   
 0.996
TUBRATIS_15000
40S ribosomal protein S6; Belongs to the eukaryotic ribosomal protein eS6 family.
  
 0.986
TUBRATIS_10310
Pre translocase subunit Sec63.
    
 0.981
A0A437APH6
40S ribosomal.
  
 0.981
A0A437APF5
40s ribosomal S23; Belongs to the universal ribosomal protein uS12 family.
  
 0.980
TUBRATIS_13820
40S ribosomal S7.
   
 0.977
TUBRATIS_25750
RNase P subunit p30.
   
 0.974
TUBRATIS_13470
Ribosomal S4.
  
 0.974
Your Current Organism:
Tubulinosema ratisbonensis
NCBI taxonomy Id: 291195
Other names: T. ratisbonensis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.