STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TUBRATIS_17760RING finger. (196 aa)    
Predicted Functional Partners:
A0A437APG4
Glycerophosphoryldiester phosphodiesterase.
   
 0.781
A0A437APM1
Ubiquitin-40S ribosomal S27a.
    
  0.751
A0A437AQU2
Ribosomal L40.
    
  0.724
TUBRATIS_25250
Glucose Na cotransporter.
     
 0.715
TUBRATIS_10890
Uncharacterized protein.
    
 0.655
TUBRATIS_29180
Ubiquitin-conjugating enzyme E2; Belongs to the ubiquitin-conjugating enzyme family.
    
 0.632
TUBRATIS_25060
BRCT domain-containing protein.
    
 0.617
TUBRATIS_14200
Ubiquitin activating enzyme E1.
    
 0.611
TUBRATIS_20290
Ubiquitin ligase skp1.
    
 0.591
TUBRATIS_20320
Ubiquitin conjugating enzyme E2; Belongs to the ubiquitin-conjugating enzyme family.
    
  0.581
Your Current Organism:
Tubulinosema ratisbonensis
NCBI taxonomy Id: 291195
Other names: T. ratisbonensis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.