STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DICVIV_00650S1 RNA binding domain protein. (582 aa)    
Predicted Functional Partners:
DICVIV_08090
Uncharacterized protein.
   
 0.997
DICVIV_06193
Nucleolar protein 6.
   
 0.997
DICVIV_03558
Ribosomal protein S8; Belongs to the universal ribosomal protein uS8 family.
  
 0.996
DICVIV_02709
Uncharacterized protein.
   
 0.996
DICVIV_09392
AARP2CN domain protein.
   
 
 0.994
DICVIV_06503
RNA cytidine acetyltransferase; RNA cytidine acetyltransferase with specificity toward both 18S rRNA and tRNAs. Catalyzes the formation of N(4)-acetylcytidine (ac4C) in 18S rRNA. Required for early nucleolar cleavages of precursor rRNA at sites A0, A1 and A2 during 18S rRNA synthesis. Catalyzes the formation of ac4C in serine and leucine tRNAs. Requires a tRNA-binding adapter protein for full tRNA acetyltransferase activity but not for 18S rRNA acetylation.
   
 
 0.994
DICVIV_02759
Uncharacterized protein.
   
 0.993
DICVIV_00903
WD domain, G-beta repeat protein.
   
 
 0.993
DICVIV_07528
Nop14-like family protein.
   
 0.992
DICVIV_02048
Utp21 specific WD40 associated domain protein.
   
 
 0.992
Your Current Organism:
Dictyocaulus viviparus
NCBI taxonomy Id: 29172
Other names: D. viviparus, Dictyocaulus sp. AMP-2014, bovine lungworm
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.