STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ahpC_3Thioredoxin-dependent peroxiredoxin; Peroxidase; C-terminal domain of 1-Cys peroxiredoxin family protein (212 aa)    
Predicted Functional Partners:
ahpF
ahpF: alkyl hydroperoxide reductase subunit F
 
 
 0.923
katE
Catalase family protein; Serves to protect cells from the toxic effects of hydrogen peroxide
  
 
 0.792
hflX
Gtp-binding protein hflx; GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis
 
    0.770
DM42_1274
Glutaredoxin/glutathione-dependent peroxiredoxin; Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides
   
 0.651
trxB
TRX_reduct: thioredoxin-disulfide reductase; Belongs to the class-II pyridine nucleotide-disulfide oxidoreductase family
  
 
 0.627
DM42_1766
Catalase family protein; Has an organic peroxide-dependent peroxidase activity
  
 
 0.540
DM42_4155
annotation not available
  
 
 0.540
DM42_6472
annotation not available
  
 
 0.540
Oxidoreductase
annotation not available
  
 
 0.536
DM42_7236
annotation not available
  
 
 0.536
Your Current Organism:
Burkholderia cepacia
NCBI taxonomy Id: 292
Other names: ATCC 25416, B. cepacia, Burkholderia cepacia genomovar I, CCUG 12691, CCUG 13226, CFBP 2227, CIP 80.24, DSM 7288, ICMP 5796, IFO 14074, JCM 5964, NBRC 14074, NCCB 76047, NCPPB 2993, NCTC 10743, NRRL B-14810, Pseudomonas cepacia, Pseudomonas kingii, Pseudomonas multivorans, strain 717-ICPB 25, strain Ballard 717
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