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DM42_1018 protein (Burkholderia cepacia) - STRING interaction network
"DM42_1018" - DUF883 domain-containing protein in Burkholderia cepacia
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DM42_1018DUF883 domain-containing protein (100 aa)    
Predicted Functional Partners:
WI67_03865
Uncharacterized protein (129 aa)
 
   
  0.925
WI67_02750
annotation not available (157 aa)
   
          0.728
WI67_12060
Uncharacterized protein (405 aa)
   
          0.659
WL94_32390
annotation not available (395 aa)
   
          0.551
WI67_03860
Uncharacterized protein (147 aa)
              0.531
WL94_30725
annotation not available (435 aa)
   
 
      0.512
WL94_13705
annotation not available (83 aa)
 
          0.511
holB
holB- DNA polymerase III, delta’ subunit (342 aa)
   
          0.498
fliJ
flagell_FliJ- flagellar export protein FliJ (152 aa)
   
          0.494
WI67_09765
annotation not available (585 aa)
   
          0.483
Your Current Organism:
Burkholderia cepacia
NCBI taxonomy Id: 292
Other names: ATCC 25416, B. cepacia, Burkholderia cepacia, Burkholderia cepacia genomovar I, CCUG 12691, CCUG 13226, CFBP 2227, CIP 80.24, DSM 7288, ICMP 5796, IFO 14074, JCM 5964, NBRC 14074, NCCB 76047, NCPPB 2993, NCTC 10743, NRRL B-14810, Pseudomonas cepacia, Pseudomonas kingii, Pseudomonas multivorans, strain 717-ICPB 25, strain Ballard 717
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