STRINGSTRING
WI67_03865 protein (Burkholderia cepacia) - STRING interaction network
"WI67_03865" - Uncharacterized protein in Burkholderia cepacia
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
WI67_03865Uncharacterized protein (129 aa)    
Predicted Functional Partners:
DM42_1018
DUF883 domain-containing protein (100 aa)
 
   
  0.925
WI67_03860
Uncharacterized protein (147 aa)
              0.800
WI67_02750
annotation not available (157 aa)
   
          0.685
WI67_12060
Uncharacterized protein (405 aa)
   
          0.593
rnpA
Ribonuclease P protein component; RNaseP catalyzes the removal of the 5’-leader sequence from pre-tRNA to produce the mature 5’-terminus. It can also cleave other RNA substrates such as 4.5S RNA. The protein component plays an auxiliary but essential role in vivo by binding to the 5’-leader sequence and broadening the substrate specificity of the ribozyme (101 aa)
   
          0.532
lolB
Outer-membrane lipoprotein LolB; Plays a critical role in the incorporation of lipoproteins in the outer membrane after they are released by the LolA protein (204 aa)
   
        0.531
WI67_05365
annotation not available (91 aa)
   
          0.530
WL94_15085
annotation not available (1035 aa)
   
          0.486
WI67_05030
Uncharacterized protein (199 aa)
   
          0.476
WI67_02600
Uncharacterized protein (158 aa)
   
          0.473
Your Current Organism:
Burkholderia cepacia
NCBI taxonomy Id: 292
Other names: ATCC 25416, B. cepacia, Burkholderia cepacia, Burkholderia cepacia genomovar I, CCUG 12691, CCUG 13226, CFBP 2227, CIP 80.24, DSM 7288, ICMP 5796, IFO 14074, JCM 5964, NBRC 14074, NCCB 76047, NCPPB 2993, NCTC 10743, NRRL B-14810, Pseudomonas cepacia, Pseudomonas kingii, Pseudomonas multivorans, strain 717-ICPB 25, strain Ballard 717
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