Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
DM42_1018 | DM42_1019 | DM42_1018 | DM42_1019 | Hypothetical protein; DUF883 domain-containing protein | Hypothetical protein; Uncharacterized protein | 0.928 |
DM42_1018 | DM42_1020 | DM42_1018 | DM42_1020 | Hypothetical protein; DUF883 domain-containing protein | Hypothetical protein; Uncharacterized protein | 0.531 |
DM42_1018 | DM42_2844 | DM42_1018 | DM42_2844 | Hypothetical protein; DUF883 domain-containing protein | Hypothetical protein; Uncharacterized protein | 0.659 |
DM42_1018 | lolB | DM42_1018 | DM42_2270 | Hypothetical protein; DUF883 domain-containing protein | Outer membrane lipoprotein lolb; Plays a critical role in the incorporation of lipoproteins in the outer membrane after they are released by the LolA protein | 0.437 |
DM42_1018 | pcp_4 | DM42_1018 | DM42_1242 | Hypothetical protein; DUF883 domain-containing protein | annotation not available | 0.728 |
DM42_1018 | rnpA | DM42_1018 | DM42_1788 | Hypothetical protein; DUF883 domain-containing protein | Ribonuclease p protein component; RNaseP catalyzes the removal of the 5'-leader sequence from pre-tRNA to produce the mature 5'-terminus. It can also cleave other RNA substrates such as 4.5S RNA. The protein component plays an auxiliary but essential role in vivo by binding to the 5'-leader sequence and broadening the substrate specificity of the ribozyme | 0.415 |
DM42_1019 | DM42_1018 | DM42_1019 | DM42_1018 | Hypothetical protein; Uncharacterized protein | Hypothetical protein; DUF883 domain-containing protein | 0.928 |
DM42_1019 | DM42_1020 | DM42_1019 | DM42_1020 | Hypothetical protein; Uncharacterized protein | Hypothetical protein; Uncharacterized protein | 0.800 |
DM42_1019 | DM42_1272 | DM42_1019 | DM42_1272 | Hypothetical protein; Uncharacterized protein | Hypothetical protein; Uncharacterized protein | 0.473 |
DM42_1019 | DM42_2409 | DM42_1019 | DM42_2409 | Hypothetical protein; Uncharacterized protein | annotation not available | 0.486 |
DM42_1019 | DM42_2844 | DM42_1019 | DM42_2844 | Hypothetical protein; Uncharacterized protein | Hypothetical protein; Uncharacterized protein | 0.593 |
DM42_1019 | DM42_719 | DM42_1019 | DM42_719 | Hypothetical protein; Uncharacterized protein | annotation not available | 0.530 |
DM42_1019 | DM42_786 | DM42_1019 | DM42_786 | Hypothetical protein; Uncharacterized protein | Uncharacterized protein | 0.476 |
DM42_1019 | lolB | DM42_1019 | DM42_2270 | Hypothetical protein; Uncharacterized protein | Outer membrane lipoprotein lolb; Plays a critical role in the incorporation of lipoproteins in the outer membrane after they are released by the LolA protein | 0.530 |
DM42_1019 | pcp_4 | DM42_1019 | DM42_1242 | Hypothetical protein; Uncharacterized protein | annotation not available | 0.700 |
DM42_1019 | rnpA | DM42_1019 | DM42_1788 | Hypothetical protein; Uncharacterized protein | Ribonuclease p protein component; RNaseP catalyzes the removal of the 5'-leader sequence from pre-tRNA to produce the mature 5'-terminus. It can also cleave other RNA substrates such as 4.5S RNA. The protein component plays an auxiliary but essential role in vivo by binding to the 5'-leader sequence and broadening the substrate specificity of the ribozyme | 0.532 |
DM42_1020 | DM42_1018 | DM42_1020 | DM42_1018 | Hypothetical protein; Uncharacterized protein | Hypothetical protein; DUF883 domain-containing protein | 0.531 |
DM42_1020 | DM42_1019 | DM42_1020 | DM42_1019 | Hypothetical protein; Uncharacterized protein | Hypothetical protein; Uncharacterized protein | 0.800 |
DM42_1020 | DM42_1272 | DM42_1020 | DM42_1272 | Hypothetical protein; Uncharacterized protein | Hypothetical protein; Uncharacterized protein | 0.684 |
DM42_1020 | DM42_786 | DM42_1020 | DM42_786 | Hypothetical protein; Uncharacterized protein | Uncharacterized protein | 0.559 |
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