Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
DM42_1190 | Pal | DM42_1190 | DM42_3537 | annotation not available | Peptidoglycan-associated lipoprotein; Part of the Tol-Pal system, which plays a role in outer membrane invagination during cell division and is important for maintaining outer membrane integrity | 0.684 |
DM42_1190 | pal | DM42_1190 | DM42_1030 | annotation not available | Peptidoglycan-associated lipoprotein; Part of the Tol-Pal system, which plays a role in outer membrane invagination during cell division and is important for maintaining outer membrane integrity | 0.672 |
DM42_1190 | tolA | DM42_1190 | DM42_1028 | annotation not available | Colicin import membrane protein; tolA_full: protein TolA | 0.513 |
DM42_1190 | tolB | DM42_1190 | DM42_1029 | annotation not available | annotation not available | 0.532 |
DM42_1190 | tolQ | DM42_1190 | DM42_1026 | annotation not available | Biopolymer transport protein tolq; Part of the Tol-Pal system, which plays a role in outer membrane invagination during cell division and is important for maintaining outer membrane integrity | 0.856 |
DM42_1190 | ybgC | DM42_1190 | DM42_1025 | annotation not available | thio_ybgC: tol-pal system-associated acyl-CoA thioesterase | 0.497 |
DM42_4529 | Pal | DM42_4529 | DM42_3537 | annotation not available | Peptidoglycan-associated lipoprotein; Part of the Tol-Pal system, which plays a role in outer membrane invagination during cell division and is important for maintaining outer membrane integrity | 0.650 |
DM42_4529 | pal | DM42_4529 | DM42_1030 | annotation not available | Peptidoglycan-associated lipoprotein; Part of the Tol-Pal system, which plays a role in outer membrane invagination during cell division and is important for maintaining outer membrane integrity | 0.596 |
DM42_4529 | tolA | DM42_4529 | DM42_1028 | annotation not available | Colicin import membrane protein; tolA_full: protein TolA | 0.513 |
DM42_4529 | tolB | DM42_4529 | DM42_1029 | annotation not available | annotation not available | 0.516 |
DM42_4529 | tolQ | DM42_4529 | DM42_1026 | annotation not available | Biopolymer transport protein tolq; Part of the Tol-Pal system, which plays a role in outer membrane invagination during cell division and is important for maintaining outer membrane integrity | 0.858 |
DM42_4529 | ybgC | DM42_4529 | DM42_1025 | annotation not available | thio_ybgC: tol-pal system-associated acyl-CoA thioesterase | 0.502 |
Pal | DM42_1190 | DM42_3537 | DM42_1190 | Peptidoglycan-associated lipoprotein; Part of the Tol-Pal system, which plays a role in outer membrane invagination during cell division and is important for maintaining outer membrane integrity | annotation not available | 0.684 |
Pal | DM42_4529 | DM42_3537 | DM42_4529 | Peptidoglycan-associated lipoprotein; Part of the Tol-Pal system, which plays a role in outer membrane invagination during cell division and is important for maintaining outer membrane integrity | annotation not available | 0.650 |
Pal | exbD_9 | DM42_3537 | DM42_2866 | Peptidoglycan-associated lipoprotein; Part of the Tol-Pal system, which plays a role in outer membrane invagination during cell division and is important for maintaining outer membrane integrity | annotation not available | 0.679 |
Pal | tolB | DM42_3537 | DM42_1029 | Peptidoglycan-associated lipoprotein; Part of the Tol-Pal system, which plays a role in outer membrane invagination during cell division and is important for maintaining outer membrane integrity | annotation not available | 0.993 |
Pal | tolQ | DM42_3537 | DM42_1026 | Peptidoglycan-associated lipoprotein; Part of the Tol-Pal system, which plays a role in outer membrane invagination during cell division and is important for maintaining outer membrane integrity | Biopolymer transport protein tolq; Part of the Tol-Pal system, which plays a role in outer membrane invagination during cell division and is important for maintaining outer membrane integrity | 0.946 |
Pal | tolR | DM42_3537 | DM42_1027 | Peptidoglycan-associated lipoprotein; Part of the Tol-Pal system, which plays a role in outer membrane invagination during cell division and is important for maintaining outer membrane integrity | Biopolymer transport protein tolr; tolR: protein TolR | 0.903 |
Pal | ybgC | DM42_3537 | DM42_1025 | Peptidoglycan-associated lipoprotein; Part of the Tol-Pal system, which plays a role in outer membrane invagination during cell division and is important for maintaining outer membrane integrity | thio_ybgC: tol-pal system-associated acyl-CoA thioesterase | 0.758 |
Pal | ygbF | DM42_3537 | DM42_1031 | Peptidoglycan-associated lipoprotein; Part of the Tol-Pal system, which plays a role in outer membrane invagination during cell division and is important for maintaining outer membrane integrity | Tol-pal system protein ybgf; Mediates coordination of peptidoglycan synthesis and outer membrane constriction during cell division | 0.751 |
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