STRINGSTRING
DM42_1040 protein (Burkholderia cepacia) - STRING interaction network
"DM42_1040" - annotation not available in Burkholderia cepacia
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DM42_1040annotation not available (315 aa)    
Predicted Functional Partners:
DM42_4919
annotation not available (75 aa)
    
 
      0.699
WL94_21515
Alkyl hydroperoxide reductase AhpD; Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity (109 aa)
 
          0.679
WL94_07050
annotation not available (307 aa)
    
 
      0.655
DM42_4218
annotation not available (257 aa)
 
 
 
  0.625
WL94_02490
annotation not available (311 aa)
    
 
      0.615
DM42_7225
annotation not available (301 aa)
    
 
      0.602
DM42_6887
annotation not available (143 aa)
    
 
      0.587
DM42_4251
annotation not available (358 aa)
    
          0.578
DM42_5754
annotation not available (285 aa)
    
 
      0.574
yiaA
annotation not available (147 aa)
              0.570
Your Current Organism:
Burkholderia cepacia
NCBI taxonomy Id: 292
Other names: ATCC 25416, B. cepacia, Burkholderia cepacia, Burkholderia cepacia genomovar I, CCUG 12691, CCUG 13226, CFBP 2227, CIP 80.24, DSM 7288, ICMP 5796, IFO 14074, JCM 5964, NBRC 14074, NCCB 76047, NCPPB 2993, NCTC 10743, NRRL B-14810, Pseudomonas cepacia, Pseudomonas kingii, Pseudomonas multivorans, strain 717-ICPB 25, strain Ballard 717
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