Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
DM42_1055 | DM42_1060 | DM42_1055 | DM42_1060 | annotation not available | annotation not available | 0.685 |
DM42_1055 | DM42_1061 | DM42_1055 | DM42_1061 | annotation not available | annotation not available | 0.585 |
DM42_1055 | DM42_1062 | DM42_1055 | DM42_1062 | annotation not available | annotation not available | 0.633 |
DM42_1055 | RfbB | DM42_1055 | DM42_1059 | annotation not available | dTDP_gluc_dehyt: dTDP-glucose 4,6-dehydratase | 0.860 |
DM42_1055 | RfbD | DM42_1055 | DM42_1058 | annotation not available | rmlD: dTDP-4-dehydrorhamnose reductase | 0.878 |
DM42_1055 | rfbA | DM42_1055 | DM42_1057 | annotation not available | Glucose-1-phosphate thymidylyltransferase; Catalyzes the formation of dTDP-glucose, from dTTP and glucose 1-phosphate, as well as its pyrophosphorolysis | 0.883 |
DM42_1055 | rfbC | DM42_1055 | DM42_1056 | annotation not available | DTDP-4-dehydrorhamnose 3,5-epimerase; Catalyzes the epimerization of the C3' and C5'positions of dTDP-6-deoxy-D-xylo-4-hexulose, forming dTDP-6-deoxy-L-lyxo-4-hexulose | 0.907 |
DM42_1060 | DM42_1055 | DM42_1060 | DM42_1055 | annotation not available | annotation not available | 0.685 |
DM42_1060 | DM42_1061 | DM42_1060 | DM42_1061 | annotation not available | annotation not available | 0.618 |
DM42_1060 | DM42_1062 | DM42_1060 | DM42_1062 | annotation not available | annotation not available | 0.479 |
DM42_1060 | RfbB | DM42_1060 | DM42_1059 | annotation not available | dTDP_gluc_dehyt: dTDP-glucose 4,6-dehydratase | 0.662 |
DM42_1060 | RfbD | DM42_1060 | DM42_1058 | annotation not available | rmlD: dTDP-4-dehydrorhamnose reductase | 0.654 |
DM42_1060 | rfbA | DM42_1060 | DM42_1057 | annotation not available | Glucose-1-phosphate thymidylyltransferase; Catalyzes the formation of dTDP-glucose, from dTTP and glucose 1-phosphate, as well as its pyrophosphorolysis | 0.625 |
DM42_1060 | rfbC | DM42_1060 | DM42_1056 | annotation not available | DTDP-4-dehydrorhamnose 3,5-epimerase; Catalyzes the epimerization of the C3' and C5'positions of dTDP-6-deoxy-D-xylo-4-hexulose, forming dTDP-6-deoxy-L-lyxo-4-hexulose | 0.649 |
DM42_1060 | ribD | DM42_1060 | DM42_881 | annotation not available | Diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase; Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'- phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)-pyrimidinedione 5'- phosphate | 0.400 |
DM42_1060 | rpsE | DM42_1060 | DM42_1456 | annotation not available | Small subunit ribosomal protein s5; Located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body | 0.407 |
DM42_1061 | DM42_1055 | DM42_1061 | DM42_1055 | annotation not available | annotation not available | 0.585 |
DM42_1061 | DM42_1060 | DM42_1061 | DM42_1060 | annotation not available | annotation not available | 0.618 |
DM42_1061 | DM42_1062 | DM42_1061 | DM42_1062 | annotation not available | annotation not available | 0.936 |
DM42_1061 | RfbB | DM42_1061 | DM42_1059 | annotation not available | dTDP_gluc_dehyt: dTDP-glucose 4,6-dehydratase | 0.785 |
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