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pcnB protein (Burkholderia cepacia) - STRING interaction network
"pcnB" - Poly(A) polymerase I in Burkholderia cepacia
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query proteins and first shell of interactors
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second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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Gene Fusion
Cooccurence
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[Homology]
Score
pcnBPoly(A) polymerase I; Adds poly(A) tail to the 3’ end of many RNAs, which usually targets these RNAs for decay. Plays a significant role in the global control of gene expression, through influencing the rate of transcript degradation, and in the general RNA quality control (516 aa)    
Predicted Functional Partners:
hda
dnaA_homol_Hda- DnaA regulatory inactivator Hda; Belongs to the DnaA family (244 aa)
 
 
      0.921
folK
folK- 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase (180 aa)
   
   
  0.912
WI67_03565
HAD-SF-IB- HAD phosphoserine phosphatase-like hydrolase, IB family protein (225 aa)
 
        0.909
WL94_21710
annotation not available (228 aa)
   
        0.821
polA
DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5’-3’ exonuclease activity (917 aa)
 
   
  0.808
gluQ
Glutamyl-Q tRNA(Asp) synthetase; Catalyzes the tRNA-independent activation of glutamate in presence of ATP and the subsequent transfer of glutamate onto a tRNA(Asp). Glutamate is transferred on the 2-amino-5-(4,5- dihydroxy-2-cyclopenten-1-yl) moiety of the queuosine in the wobble position of the QUC anticodon (298 aa)
 
   
  0.778
pnp
Polyribonucleotide nucleotidyltransferase; Involved in mRNA degradation. Catalyzes the phosphorolysis of single-stranded polyribonucleotides processively in the 3’- to 5’-direction (715 aa)
   
 
  0.698
hrpA
DEAH_box_HrpA- ATP-dependent helicase HrpA (1402 aa)
 
      0.691
WL94_21715
3-methyl-2-oxobutanoate hydroxymethyltransferase; Catalyzes the reversible reaction in which hydroxymethyl group from 5,10-methylenetetrahydrofolate is transferred onto alpha-ketoisovalerate to form ketopantoate; Belongs to the PanB family (271 aa)
   
   
  0.690
recO
DNA repair protein RecO; Involved in DNA repair and RecF pathway recombination (278 aa)
 
        0.682
Your Current Organism:
Burkholderia cepacia
NCBI taxonomy Id: 292
Other names: ATCC 25416, B. cepacia, Burkholderia cepacia, Burkholderia cepacia genomovar I, CCUG 12691, CCUG 13226, CFBP 2227, CIP 80.24, DSM 7288, ICMP 5796, IFO 14074, JCM 5964, NBRC 14074, NCCB 76047, NCPPB 2993, NCTC 10743, NRRL B-14810, Pseudomonas cepacia, Pseudomonas kingii, Pseudomonas multivorans, strain 717-ICPB 25, strain Ballard 717
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